state (Emission order) Genome % CpGIsland.mm10.bed.gz RefSeqExon.mm10.bed.gz RefSeqGene.mm10.bed.gz RefSeqTES.mm10.bed.gz RefSeqTSS.mm10.bed.gz RefSeqTSS2kb.mm10.bed.gz 1 2.16004 0.03520 0.85885 1.47967 1.11142 0.40834 1.10448 2 1.95428 35.11809 4.61434 1.91682 2.31270 24.64808 13.83677 3 3.10236 0.17753 1.84920 1.67040 2.17221 1.03627 2.01194 4 6.25149 0.49828 3.56547 1.83164 3.72971 1.22144 2.11414 5 85.99893 0.08257 0.67152 0.87767 0.71467 0.35051 0.50737 6 0.53289 38.51882 6.28851 1.77686 2.93337 18.67983 14.03915 Base 100 0.38473 2.41702 36.75401 0.00095 0.00102 3.52912