state (Emission order) Genome % CpGIsland.mm10.bed.gz RefSeqExon.mm10.bed.gz RefSeqGene.mm10.bed.gz RefSeqTES.mm10.bed.gz RefSeqTSS.mm10.bed.gz RefSeqTSS2kb.mm10.bed.gz 1 0.45634 45.76057 6.40856 1.85725 3.13788 23.89608 17.58549 2 89.87518 0.11232 0.78129 0.91512 0.81050 0.37253 0.57933 3 3.42312 0.59515 3.53374 1.86492 4.08616 1.54600 1.89953 4 2.66287 0.15423 1.71945 1.71219 2.00312 1.03425 1.78806 5 1.89663 0.04340 0.91682 1.45908 1.28409 0.36634 1.42442 6 1.68586 39.44137 5.00816 1.89557 2.35354 27.80382 15.38803 Base 100 0.38473 2.41702 36.75401 0.00095 0.00102 3.52912