{
  "Sample_QC_info": {
    "data_information": {
        "file_name": "2.iMT_1",
        "genome": "hg38",
        "read_type": "Paired-end data",
        "pipe_version": "v1.00",
        "Docker_image_id": "sha256:8896f8f11c355df12838687e195d59aa152c56ecbbc891cbd404da81abc758a3",
        "bash_script_MD5": "f281c99b69baed5d8e94154dbcf0ad16",
        "running_time": "Fri_Oct__4_08:31:52_CDT_2019"
    },
    "pre_alignment_stats": {
        "program1": "cutadapt",
        "program1_version": "1.16",
        "written_reads_by_cutadapt": 46844387,
        "program2": "FastQC",
        "program2_version": "0.11.7"
    },
    "mapping_stats": {
        "alignment_program": "bwa",
        "alignment_program_version": "0.7.16a",
        "alignment_program_parameters": "bwa mem",
        "post_alignment_program": "methylQA",
        "post_alignment_program_version": "0.2.1",
        "post_alignment_program_parameters": "methylQA atac",
        "total_reads": 49580449,
        "mapped_reads": 42961236,
        "uniquely_mapped_reads": 38525265,
        "non-redundant_mapped_reads": 37055193,
        "useful_single_ends": 74110386
    },
    "library_complexity": {
        "before_alignment_library_duplicates_percentage": 0.1024,
        "after_alignment_PCR_duplicates_percentage": 0.039
    },
    "insertion_size_distribution": {
        "insertion_size": [0,0.978473581213307,1.95694716242661,2.93542074363992,3.91389432485323,4.89236790606654,5.87084148727984,6.84931506849315,7.82778864970646,8.80626223091977,9.78473581213307,10.7632093933464,11.7416829745597,12.720156555773,13.6986301369863,14.6771037181996,15.6555772994129,16.6340508806262,17.6125244618395,18.5909980430528,19.5694716242661,20.5479452054795,21.5264187866928,22.5048923679061,23.4833659491194,24.4618395303327,25.440313111546,26.4187866927593,27.3972602739726,28.3757338551859,29.3542074363992,30.3326810176125,31.3111545988258,32.2896281800391,33.2681017612524,34.2465753424658,35.2250489236791,36.2035225048924,37.1819960861057,38.160469667319,39.1389432485323,40.1174168297456,41.0958904109589,42.0743639921722,43.0528375733855,44.0313111545988,45.0097847358121,45.9882583170254,46.9667318982387,47.945205479452,48.9236790606654,49.9021526418787,50.880626223092,51.8590998043053,52.8375733855186,53.8160469667319,54.7945205479452,55.7729941291585,56.7514677103718,57.7299412915851,58.7084148727984,59.6868884540117,60.665362035225,61.6438356164384,62.6223091976517,63.600782778865,64.5792563600783,65.5577299412916,66.5362035225049,67.5146771037182,68.4931506849315,69.4716242661448,70.4500978473581,71.4285714285714,72.4070450097847,73.385518590998,74.3639921722113,75.3424657534246,76.320939334638,77.2994129158513,78.2778864970646,79.2563600782779,80.2348336594912,81.2133072407045,82.1917808219178,83.1702544031311,84.1487279843444,85.1272015655577,86.105675146771,87.0841487279843,88.0626223091976,89.041095890411,90.0195694716243,90.9980430528376,91.9765166340509,92.9549902152642,93.9334637964775,94.9119373776908,95.8904109589041,96.8688845401174,97.8473581213307,98.825831702544,99.8043052837573,100.782778864971,101.761252446184,102.739726027397,103.718199608611,104.696673189824,105.675146771037,106.65362035225,107.632093933464,108.610567514677,109.58904109589,110.567514677104,111.545988258317,112.52446183953,113.502935420744,114.481409001957,115.45988258317,116.438356164384,117.416829745597,118.39530332681,119.373776908023,120.352250489237,121.33072407045,122.309197651663,123.287671232877,124.26614481409,125.244618395303,126.223091976517,127.20156555773,128.180039138943,129.158512720157,130.13698630137,131.115459882583,132.093933463796,133.07240704501,134.050880626223,135.029354207436,136.00782778865,136.986301369863,137.964774951076,138.94324853229,139.921722113503,140.900195694716,141.87866927593,142.857142857143,143.835616438356,144.814090019569,145.792563600783,146.771037181996,147.749510763209,148.727984344423,149.706457925636,150.684931506849,151.663405088063,152.641878669276,153.620352250489,154.598825831703,155.577299412916,156.555772994129,157.534246575342,158.512720156556,159.491193737769,160.469667318982,161.448140900196,162.426614481409,163.405088062622,164.383561643836,165.362035225049,166.340508806262,167.318982387476,168.297455968689,169.275929549902,170.254403131115,171.232876712329,172.211350293542,173.189823874755,174.168297455969,175.146771037182,176.125244618395,177.103718199609,178.082191780822,179.060665362035,180.039138943249,181.017612524462,181.996086105675,182.974559686888,183.953033268102,184.931506849315,185.909980430528,186.888454011742,187.866927592955,188.845401174168,189.823874755382,190.802348336595,191.780821917808,192.759295499022,193.737769080235,194.716242661448,195.694716242661,196.673189823875,197.651663405088,198.630136986301,199.608610567515,200.587084148728,201.565557729941,202.544031311155,203.522504892368,204.500978473581,205.479452054795,206.457925636008,207.436399217221,208.414872798434,209.393346379648,210.371819960861,211.350293542074,212.328767123288,213.307240704501,214.285714285714,215.264187866928,216.242661448141,217.221135029354,218.199608610568,219.178082191781,220.156555772994,221.135029354207,222.113502935421,223.091976516634,224.070450097847,225.048923679061,226.027397260274,227.005870841487,227.984344422701,228.962818003914,229.941291585127,230.91976516634,231.898238747554,232.876712328767,233.85518590998,234.833659491194,235.812133072407,236.79060665362,237.769080234834,238.747553816047,239.72602739726,240.704500978474,241.682974559687,242.6614481409,243.639921722113,244.618395303327,245.59686888454,246.575342465753,247.553816046967,248.53228962818,249.510763209393,250.489236790607,251.46771037182,252.446183953033,253.424657534247,254.40313111546,255.381604696673,256.360078277886,257.3385518591,258.317025440313,259.295499021526,260.27397260274,261.252446183953,262.230919765166,263.20939334638,264.187866927593,265.166340508806,266.14481409002,267.123287671233,268.101761252446,269.080234833659,270.058708414873,271.037181996086,272.015655577299,272.994129158513,273.972602739726,274.951076320939,275.929549902153,276.908023483366,277.886497064579,278.864970645793,279.843444227006,280.821917808219,281.800391389432,282.778864970646,283.757338551859,284.735812133072,285.714285714286,286.692759295499,287.671232876712,288.649706457926,289.628180039139,290.606653620352,291.585127201566,292.563600782779,293.542074363992,294.520547945205,295.499021526419,296.477495107632,297.455968688845,298.434442270059,299.412915851272,300.391389432485,301.369863013699,302.348336594912,303.326810176125,304.305283757339,305.283757338552,306.262230919765,307.240704500978,308.219178082192,309.197651663405,310.176125244618,311.154598825832,312.133072407045,313.111545988258,314.090019569472,315.068493150685,316.046966731898,317.025440313112,318.003913894325,318.982387475538,319.960861056751,320.939334637965,321.917808219178,322.896281800391,323.874755381605,324.853228962818,325.831702544031,326.810176125245,327.788649706458,328.767123287671,329.745596868885,330.724070450098,331.702544031311,332.681017612524,333.659491193738,334.637964774951,335.616438356164,336.594911937378,337.573385518591,338.551859099804,339.530332681018,340.508806262231,341.487279843444,342.465753424658,343.444227005871,344.422700587084,345.401174168297,346.379647749511,347.358121330724,348.336594911937,349.315068493151,350.293542074364,351.272015655577,352.250489236791,353.228962818004,354.207436399217,355.18590998043,356.164383561644,357.142857142857,358.12133072407,359.099804305284,360.078277886497,361.05675146771,362.035225048924,363.013698630137,363.99217221135,364.970645792564,365.949119373777,366.92759295499,367.906066536204,368.884540117417,369.86301369863,370.841487279843,371.819960861057,372.79843444227,373.776908023483,374.755381604697,375.73385518591,376.712328767123,377.690802348337,378.66927592955,379.647749510763,380.626223091976,381.60469667319,382.583170254403,383.561643835616,384.54011741683,385.518590998043,386.497064579256,387.47553816047,388.454011741683,389.432485322896,390.41095890411,391.389432485323,392.367906066536,393.346379647749,394.324853228963,395.303326810176,396.281800391389,397.260273972603,398.238747553816,399.217221135029,400.195694716243,401.174168297456,402.152641878669,403.131115459883,404.109589041096,405.088062622309,406.066536203523,407.045009784736,408.023483365949,409.001956947162,409.980430528376,410.958904109589,411.937377690802,412.915851272016,413.894324853229,414.872798434442,415.851272015656,416.829745596869,417.808219178082,418.786692759295,419.765166340509,420.743639921722,421.722113502935,422.700587084149,423.679060665362,424.657534246575,425.636007827789,426.614481409002,427.592954990215,428.571428571429,429.549902152642,430.528375733855,431.506849315068,432.485322896282,433.463796477495,434.442270058708,435.420743639922,436.399217221135,437.377690802348,438.356164383562,439.334637964775,440.313111545988,441.291585127202,442.270058708415,443.248532289628,444.227005870841,445.205479452055,446.183953033268,447.162426614481,448.140900195695,449.119373776908,450.097847358121,451.076320939335,452.054794520548,453.033268101761,454.011741682975,454.990215264188,455.968688845401,456.947162426614,457.925636007828,458.904109589041,459.882583170254,460.861056751468,461.839530332681,462.818003913894,463.796477495108,464.774951076321,465.753424657534,466.731898238748,467.710371819961,468.688845401174,469.667318982387,470.645792563601,471.624266144814,472.602739726027,473.581213307241,474.559686888454,475.538160469667,476.516634050881,477.495107632094,478.473581213307,479.452054794521,480.430528375734,481.409001956947,482.38747553816,483.365949119374,484.344422700587,485.3228962818,486.301369863014,487.279843444227,488.25831702544,489.236790606654,490.215264187867,491.19373776908,492.172211350294,493.150684931507,494.12915851272,495.107632093933,496.086105675147,497.06457925636,498.043052837573,499.021526418787,500],
        "density": [2.14587815689395e-05,3.73580349723764e-05,6.36730266581992e-05,0.000107228635988814,0.000181353373417609,0.000300347715437966,0.000487259112097708,0.000774645521938775,0.00120737299965268,0.00184578169748435,0.00276911123470023,0.00407902008737695,0.00590297380328967,0.0084601936781561,0.0119823486460348,0.0166608721156848,0.0227537099351505,0.0305363492088059,0.0402910536769346,0.0522931109013232,0.0667945090875254,0.0840057176723334,0.104076505495125,0.127377232312047,0.153598384019225,0.182474100087551,0.213698813252442,0.246866838655361,0.281490717015181,0.317026699017598,0.352905988585214,0.388569876714885,0.423492212122252,0.457073464163499,0.489153838864905,0.519628786524983,0.548533733385497,0.576031128566647,0.602387236208528,0.627940526717451,0.65306403417162,0.678124460960632,0.703465231158635,0.729349622671277,0.755802907522069,0.782733770445595,0.809917033198301,0.837008822332131,0.863570668744015,0.889100404336851,0.913067396296777,0.934949433315375,0.954014194581762,0.969915711309078,0.982531850877485,0.991739523895593,0.997530153834621,1,0.999335088726594,0.995792467243098,0.989679547988916,0.981333280018693,0.970925599117624,0.959046139951901,0.946017389718346,0.932114037794004,0.917577904185187,0.902617558017211,0.887409322743908,0.872099173777629,0.856805132947071,0.841624865049279,0.826650530054875,0.811912340293742,0.79743714162133,0.783239856789142,0.769326217155489,0.755695274775658,0.742341596641528,0.729257069234677,0.716432274603422,0.703872417750312,0.69156701548382,0.679490947565819,0.667636732829201,0.655998153261728,0.644570515121606,0.633350853251844,0.622338017811306,0.611532590671041,0.600936595018454,0.590574357084873,0.580434865087297,0.570513556661222,0.560810929584651,0.551325821855155,0.542055465236019,0.532995754307576,0.52414166962034,0.515487778958052,0.507029763276987,0.498784639085363,0.490724526934816,0.482846473900142,0.475148131596363,0.467627577002004,0.460283138424956,0.453113245610417,0.44611631182913,0.439290646337141,0.432641314572414,0.426173476132855,0.419869657680122,0.413726898011587,0.407741834123452,0.401910716633995,0.396229454232803,0.390693676419861,0.385298799761467,0.380040080667461,0.374922335609345,0.369936032649168,0.365068983554709,0.360315514423044,0.35566971841853,0.351125578553842,0.346677166766699,0.342318901009188,0.338045830564971,0.333853910151993,0.329748915272641,0.325721642033747,0.321770788483401,0.317897067688868,0.31410168413244,0.310386062141644,0.306751627935819,0.303199667982171,0.299731272323216,0.296349087598653,0.293061670260118,0.289860600153241,0.286746702324772,0.283720747168179,0.280783344430364,0.277934829423676,0.275175168825765,0.272503908240285,0.2699201761239,0.26742750978159,0.265025527012696,0.262706333558398,0.260468329924359,0.258309864903548,0.256229135876264,0.25422405370966,0.252292101816145,0.250430220061847,0.24863474233915,0.246906597649012,0.245236647237337,0.243617564774627,0.242044379809689,0.240512365965674,0.239017163755685,0.237554852635632,0.236121980680545,0.234715566673831,0.233333093986842,0.231975110768397,0.230637326784147,0.229319116705882,0.228020549647777,0.22674236185343,0.225485879476578,0.224252862140862,0.223045269609857,0.221864963847651,0.22071439219832,0.219595729701316,0.218505107469363,0.217439999087112,0.216396541465847,0.215369692341151,0.21435349719441,0.213341443366688,0.212326873371614,0.211303424761766,0.210264064081995,0.209203944038229,0.208121573295334,0.207016075752539,0.205887916644961,0.204738651168399,0.203570593059529,0.20238643917552,0.20118888859583,0.199980295065102,0.1987614812092,0.197534015876968,0.196297790512383,0.195051785070075,0.193794410434432,0.192523644044761,0.19123714407673,0.189932330550425,0.188606429958794,0.187256104757997,0.185874840730504,0.184462044768692,0.183014259677539,0.181528063658585,0.180000207383199,0.178427757576863,0.176808229715312,0.175139694456442,0.173420845656379,0.171648482820001,0.169821200751634,0.167943804704884,0.166017451441408,0.164043632630326,0.162024118034399,0.159960913966309,0.15785623358041,0.155712474122496,0.153532195615663,0.15131548951491,0.149067162352948,0.146791561129535,0.14449159720058,0.142170198571655,0.139830319438727,0.137474963639477,0.13510721719758,0.132730283363243,0.130347512235267,0.127962714197137,0.125580373112738,0.123204290356507,0.120838244356399,0.118485920637042,0.116150830698764,0.113836240515096,0.111545114467501,0.109280078765205,0.107044282556589,0.104842130091479,0.102672215806058,0.100535748594103,0.0984337258611488,0.0963669691947736,0.094336153790803,0.0923418312053635,0.0903844459032032,0.0884643468420884,0.0865842405927438,0.0847443306283687,0.0829422724561111,0.0811781105182607,0.0794518623366553,0.0777635333688391,0.0761131278027266,0.07450065307911,0.0729261164733409,0.0713895128099614,0.069894607711235,0.0684385102131836,0.0670198738125503,0.0656383091153604,0.0642932940198805,0.0629841838672409,0.0617102346462574,0.0604706368194496,0.0592645560782334,0.0580914123668024,0.0569539992047306,0.0558477050504213,0.0547720102939582,0.0537264827303699,0.0527107570976398,0.0517245110991247,0.0507674416858862,0.0498392445887442,0.0489395991281425,0.0480693660691019,0.047229266033531,0.0464164507223081,0.0456304588723181,0.0448707831833249,0.0441368593911491,0.0434280558194835,0.0427436664456354,0.0420829104702427,0.041444941027836,0.0408305189804027,0.0402379183627579,0.0396652153749344,0.0391116746647551,0.038576689537234,0.0380597974537708,0.0375606802168068,0.0370791488947274,0.0366151150645757,0.0361685513860803,0.0357414544956279,0.0353319635334127,0.0349396611825489,0.0345642585549629,0.0342053466318897,0.0338623988858428,0.0335347817501057,0.0332217710575295,0.0329225726461958,0.032636611631804,0.0323638952258077,0.0321021948400086,0.0318507223225798,0.0316087658851085,0.0313757126090984,0.0311510668157615,0.0309344626167808,0.0307256691254484,0.0305245870911292,0.0303316961653678,0.0301472532821476,0.0299708941837451,0.0298028023055108,0.0296431217596593,0.0294919264773946,0.029349196656266,0.0292148038772953,0.0290885055477155,0.0289699485975043,0.0288593053006142,0.0287554999918732,0.0286576822489058,0.0285652405446726,0.0284775669095538,0.0283940712277503,0.0283141913857875,0.0282373996955084,0.0281632063344233,0.0280911624498995,0.0280210189426,0.027952152061571,0.0278842576156373,0.0278170767653524,0.0277503969210302,0.0276840512892429,0.0276179169368603,0.0275519115651966,0.0274859894873424,0.0274201412358884,0.0273544000597166,0.0272888222121001,0.0272235050374513,0.027158584333586,0.0270942361244619,0.0270306742417161,0.0269681421358288,0.0269068979435159,0.026847192573481,0.0267893803439224,0.0267335729944823,0.0266796463831443,0.026627436517873,0.0265766349078305,0.0265267961470876,0.0264773574981567,0.0264276685808595,0.0263770284141608,0.0263247263624205,0.0262697468038744,0.0262116268654146,0.0261499609397594,0.0260844090982464,0.0260147437563794,0.0259408405538993,0.0258626642545717,0.0257802514607116,0.0256936917722787,0.0256030476664353,0.0255081019321511,0.025409439552163,0.0253071610160602,0.0252013275119066,0.0250919506646867,0.0249789843199799,0.0248623187923666,0.0247417780062498,0.0246171199258602,0.024487788143953,0.0243532147559592,0.0242133339721937,0.0240677217667509,0.0239159577114632,0.023757641222588,0.0235924061548984,0.02341993309034,0.0232399589277013,0.0230522836603991,0.0228560806135937,0.0226516631916293,0.022439402094054,0.0222194155132881,0.0219918963291953,0.0217571132803536,0.0215154104353358,0.0212672036911882,0.0210129730475331,0.020753249549418,0.0204880733722103,0.0202186610211737,0.0199455443641674,0.0196691529809102,0.0193898200414392,0.0191077712876995,0.0188231250295968,0.0185359036251441,0.0182460558441882,0.0179534018839892,0.0176576462216681,0.0173590356582958,0.0170576371340791,0.0167536222176761,0.0164472712494718,0.0161389672715362,0.0158291814151068,0.0155184519119533,0.0152073592259297,0.0148965627747648,0.0145867671214872,0.0142784860298831,0.0139721968233249,0.0136683166213236,0.0133672001445052,0.01306914129191,0.0127743781615172,0.0124831011793498,0.0121954639776209,0.0119120005751117,0.0116325712187569,0.0113572175013137,0.0110861103501761,0.010819455455802,0.0105574947868684,0.0103005029918248,0.010048778977882,0.00980263338098254,0.00956243133247535,0.00932918268853257,0.00910240148772411,0.00888225080444485,0.00866883026766088,0.00846217504008187,0.00826225829437639,0.00806899636980461,0.00788225572251932,0.00770186077722126,0.00752786774592826,0.00736021311917655,0.00719811883973202,0.00704131081825309,0.0068895094017722,0.00674243480749312,0.00659981306596345,0.00646138244105309,0.00632690013860735,0.00619614896667108,0.00606921869284532,0.00594582482292508,0.00582570832771385,0.0057088158366598,0.00559512464814548,0.00548463484457279,0.00537735961485845,0.00527331435110956,0.00517250510712114,0.00507491699009848,0.00498086000576253,0.00488987375794296,0.00480174414588963,0.00471622707508019,0.00463300299369434,0.00455166935673591,0.00447173396264417,0.00439260985456366,0.00431361270650661,0.00423392078557837,0.00415235566957387,0.00406801719780921,0.00397990403161368,0.00388702150484518,0.00378842282580263,0.00368325269655024,0.0035707907542664,0.00345049216596237,0.00332202276273112,0.00318480425156,0.00303903875901067,0.00288584510216775,0.00272600948685868,0.00256053322118915,0.00239060445073644,0.00221756662963765,0.00204288500372304,0.00186811200962461,0.0016948521030242,0.00152521952935668,0.0013608756557366,0.00120318893788916]
    },
    "mapping_distribution": {
        "percentage_of_uniquely_mapped_reads_in_chrM": 0.0212,
        "percentage_of_non-redundant_uniquely_mapped_reads_in_chrX": 0.0481,
        "percentage_of_non-redundant_uniquely_mapped_reads_in_chrY": 0.0014,
        "Percentage_of_non-redundant_uniquely_mapped_reads_in_autosome": {"chr1": 0.0821, "chr2": 0.084, "chr3": 0.0692, "chr4": 0.0639, "chr5": 0.0615, "chr6": 0.0589, "chr7": 0.0549, "chr8": 0.0508, "chr9": 0.0413, "chr10": 0.0485, "chr11": 0.0481, "chr12": 0.0471, "chr13": 0.0327, "chr14": 0.0318, "chr15": 0.0293, "chr16": 0.0309, "chr17": 0.0318, "chr18": 0.0265, "chr19": 0.0237, "chr20": 0.0247, "chr21": 0.0141, "chr22": 0.0154}
    },
    "peak_analysis": {
        "peak_calling_software": "macs2",
        "peak_calling_parameters": "--keep-dup 1000 --nomodel --shift 0 --extsize 150",
        "peak_threshold_parameter": "qvaule",
        "peak_threshold": 0.01,
        "reads_percentage_under_peaks": 0.0063,
        "reads_number_under_peaks": 468189,
        "peaks_number_in_promoter_regions": 4103,
        "peaks_number_in_non-promoter_regions": 4477
    },
    "saturation": {
        "sequence_depth": [5,10,20,30,40,50,60,70,80,90,100],
        "peaks_number": [65,107,216,433,904,1598,2428,3558,4623,7046,8580],
        "percentage_of_peak_region_recaptured": [0,0.01,0.03,0.05,0.1,0.17,0.27,0.39,0.51,0.74,1]
    },
    "enrichment": {
        "enrichment_score_in_coding_promoter_regions": 0.7,
        "subsampled_10M_enrichment_score": 69.08,
        "percentage_of_background_RPKM_larger_than_0.3777": 0.3491
    },
    "yield_distribution": {
        "total_reads": [0,1e+06,2e+06,3e+06,4e+06,5e+06,6e+06,7e+06,8e+06,9e+06,1e+07,1.1e+07,1.2e+07,1.3e+07,1.4e+07,1.5e+07,1.6e+07,1.7e+07,1.8e+07,1.9e+07,2e+07,2.1e+07,2.2e+07,2.3e+07,2.4e+07,2.5e+07,2.6e+07,2.7e+07,2.8e+07,2.9e+07,3e+07,3.1e+07,3.2e+07,3.3e+07,3.4e+07,3.5e+07,3.6e+07,3.7e+07,3.8e+07,3.9e+07,4e+07,4.1e+07,4.2e+07,4.3e+07,4.4e+07,4.5e+07,4.6e+07,4.7e+07,4.8e+07,4.9e+07,5e+07,5.1e+07,5.2e+07,5.3e+07,5.4e+07,5.5e+07,5.6e+07,5.7e+07,5.8e+07,5.9e+07,6e+07,6.1e+07,6.2e+07,6.3e+07,6.4e+07,6.5e+07,6.6e+07,6.7e+07,6.8e+07,6.9e+07,7e+07,7.1e+07,7.2e+07,7.3e+07,7.4e+07,7.5e+07,7.6e+07,7.7e+07,7.8e+07,7.9e+07,8e+07,8.1e+07,8.2e+07,8.3e+07,8.4e+07,8.5e+07,8.6e+07,8.7e+07,8.8e+07,8.9e+07,9e+07,9.1e+07,9.2e+07,9.3e+07,9.4e+07,9.5e+07,9.6e+07,9.7e+07,9.8e+07,9.9e+07,1e+08],
        "expected_distinction": [0,979854.5,1946910.5,2908183,3865006.5,4818019.5,5767552,6713843.5,7657052.5,8597309,9534718.5,10469357.5,11401297.5,12330564,13257226.5,14181341,15102947.5,16022088.5,16938791,17853087,18765003,19674571.5,20581813.5,21486748,22389402.5,23289792.5,24187939.5,25083863,25977574,26869095,27758442,28645625,29530659.5,30413563,31294339.5,32172996,33049559,33924039,34796449,35666799,36535101.5,37401366.5,38265605,39127827.5,39988042,40846260.5,41702492.5,42556747,43409033.8,44259361.4,45107738.8,45954174.7,46798677.7,47641256.4,48481918.9,49320673.5,50157528.3,50992491.2,51825570,52656772.5,53486106.2,54313578.8,55139197.5,55962969.8,56784902.9,57605003.8,58423279.7,59239737.5,60054384.1,60867226.3,61678270.7,62487524.2,63294996,64100691.9,64904615.6,65706773.5,66507171.8,67305816.8,68102714.5,68897871.1,69691292.8,70482985.5,71272955.3,72061208.2,72847750.1,73632587.2,74415725.2,75197170.3,75976881.9,76754901.8,77531245.6,78306041.6,79078876.1,79850192.9,80619852.1,81387856.7,82154213.6,82918931.5,83682058.6,84443715.1,85203762.8],
        "lower_0.95_confidnece_interval": [0,979348.9,1945817.8,2906500.6,3862733.8,4815158.8,5764106.5,6709814.9,7652445.6,8592123.4,9528958.1,10463025.4,11394396.1,12323094.4,13249192.7,14172744.2,15093790.1,16012373.4,16928519.6,17842262.6,18753627.7,19662647,20569342,21473731.7,22375843.7,23275692.6,24173301.5,25068688.8,25961865.4,26852853.8,27741670.8,28628325.3,29512833.2,30395212.3,31275466,32153601.9,33029645.9,33903608.8,34775503.9,35645340.4,36513131.5,37378886.6,38242617.4,39104333.6,39964043.7,40821759.3,41677490.5,42531245.9,43383035.1,44232866.9,45080750.1,45926693.5,46770705.7,47612795.1,48452970,49291238.5,50127608.8,50962088.8,51794686.2,52625408.8,53454264.2,54281259.8,55106403,55929701.3,56751161.7,57570791.4,58388597.1,59204587.1,60018766.4,60831142.7,61641722.6,62450512.8,63257522.7,64062757.9,64866222.5,65667924.7,66467861.2,67266045.2,68062491,68857194,69650162.9,70441403.7,71230922.3,72018721.8,72804821,73589209.7,74371901.1,75152898.9,75932169.2,76709743.6,77485657.4,78260012.6,79032408.9,79803286.4,80572530.4,81340104.8,82106042.3,82870349.8,83633075.2,84394335.7,85153987.9],
        "upper_0.95_confidnece_interval": [0,980360.3,1948003.8,2909866.3,3867280.5,4820881.9,5770999.6,6717874.5,7661662.2,8602497.7,9540482.4,10475693.4,11408203,12338038.1,13265265.1,14189943,15112110.4,16031809.5,16949068.6,17863918,18776385.2,19686503.2,20594292.6,21499772.2,22402969.6,23303900.9,24202586.4,25099046.4,25993292.1,26885346,27775223.4,28662935.2,29548496.6,30431924.8,31313224.4,32192401.8,33069484.1,33944481.5,34817406.7,35688270.6,36557084.7,37423860,38288606.4,39151335.5,40012054.7,40870776.4,41727509.5,42582263.4,43435048,44285871.7,45134743.5,45981672.3,46826666.5,47669734.6,48510885.1,49350126.1,50187465.6,51022911.7,51856472.2,52688154.9,53517967.2,54345917.1,55172011.6,55996258.2,56818664.1,57639236.6,58457982.9,59274908.7,60090022.9,60903331.2,61714840.5,62524557.5,63332491.6,64138648.4,64943031.6,65745645.3,66546505.7,67345611.8,68142961.8,68938572.3,69732447,70524591.9,71315013,72103719.6,72890704.6,73675990.2,74459575.2,75241467.8,76021621.1,76800086.6,77576860.6,78352097.8,79125370.5,79897127.1,80667201.5,81435636.7,82202413.1,82967541.6,83731070.7,84493123.4,85253566.8]
    },
    "peak_length_distribution": {
        "peak_length": [0,2.93542074363992,5.87084148727984,8.80626223091977,11.7416829745597,14.6771037181996,17.6125244618395,20.5479452054795,23.4833659491194,26.4187866927593,29.3542074363992,32.2896281800391,35.2250489236791,38.160469667319,41.0958904109589,44.0313111545988,46.9667318982387,49.9021526418787,52.8375733855186,55.7729941291585,58.7084148727984,61.6438356164384,64.5792563600783,67.5146771037182,70.4500978473581,73.385518590998,76.320939334638,79.2563600782779,82.1917808219178,85.1272015655577,88.0626223091976,90.9980430528376,93.9334637964775,96.8688845401174,99.8043052837573,102.739726027397,105.675146771037,108.610567514677,111.545988258317,114.481409001957,117.416829745597,120.352250489237,123.287671232877,126.223091976517,129.158512720157,132.093933463796,135.029354207436,137.964774951076,140.900195694716,143.835616438356,146.771037181996,149.706457925636,152.641878669276,155.577299412916,158.512720156556,161.448140900196,164.383561643836,167.318982387476,170.254403131115,173.189823874755,176.125244618395,179.060665362035,181.996086105675,184.931506849315,187.866927592955,190.802348336595,193.737769080235,196.673189823875,199.608610567515,202.544031311155,205.479452054795,208.414872798434,211.350293542074,214.285714285714,217.221135029354,220.156555772994,223.091976516634,226.027397260274,228.962818003914,231.898238747554,234.833659491194,237.769080234834,240.704500978474,243.639921722114,246.575342465753,249.510763209393,252.446183953033,255.381604696673,258.317025440313,261.252446183953,264.187866927593,267.123287671233,270.058708414873,272.994129158513,275.929549902153,278.864970645793,281.800391389432,284.735812133072,287.671232876712,290.606653620352,293.542074363992,296.477495107632,299.412915851272,302.348336594912,305.283757338552,308.219178082192,311.154598825832,314.090019569472,317.025440313112,319.960861056751,322.896281800391,325.831702544031,328.767123287671,331.702544031311,334.637964774951,337.573385518591,340.508806262231,343.444227005871,346.379647749511,349.315068493151,352.250489236791,355.185909980431,358.12133072407,361.05675146771,363.99217221135,366.92759295499,369.86301369863,372.79843444227,375.73385518591,378.66927592955,381.60469667319,384.54011741683,387.47553816047,390.41095890411,393.34637964775,396.281800391389,399.217221135029,402.152641878669,405.088062622309,408.023483365949,410.958904109589,413.894324853229,416.829745596869,419.765166340509,422.700587084149,425.636007827789,428.571428571429,431.506849315069,434.442270058708,437.377690802348,440.313111545988,443.248532289628,446.183953033268,449.119373776908,452.054794520548,454.990215264188,457.925636007828,460.861056751468,463.796477495108,466.731898238748,469.667318982387,472.602739726027,475.538160469667,478.473581213307,481.409001956947,484.344422700587,487.279843444227,490.215264187867,493.150684931507,496.086105675147,499.021526418787,501.956947162427,504.892367906067,507.827788649706,510.763209393346,513.698630136986,516.634050880626,519.569471624266,522.504892367906,525.440313111546,528.375733855186,531.311154598826,534.246575342466,537.181996086106,540.117416829746,543.052837573386,545.988258317025,548.923679060665,551.859099804305,554.794520547945,557.729941291585,560.665362035225,563.600782778865,566.536203522505,569.471624266145,572.407045009785,575.342465753425,578.277886497065,581.213307240704,584.148727984344,587.084148727984,590.019569471624,592.954990215264,595.890410958904,598.825831702544,601.761252446184,604.696673189824,607.632093933464,610.567514677104,613.502935420744,616.438356164384,619.373776908024,622.309197651663,625.244618395303,628.180039138943,631.115459882583,634.050880626223,636.986301369863,639.921722113503,642.857142857143,645.792563600783,648.727984344423,651.663405088063,654.598825831703,657.534246575342,660.469667318982,663.405088062622,666.340508806262,669.275929549902,672.211350293542,675.146771037182,678.082191780822,681.017612524462,683.953033268102,686.888454011742,689.823874755382,692.759295499022,695.694716242661,698.630136986301,701.565557729941,704.500978473581,707.436399217221,710.371819960861,713.307240704501,716.242661448141,719.178082191781,722.113502935421,725.048923679061,727.984344422701,730.919765166341,733.85518590998,736.79060665362,739.72602739726,742.6614481409,745.59686888454,748.53228962818,751.46771037182,754.40313111546,757.3385518591,760.27397260274,763.20939334638,766.14481409002,769.080234833659,772.015655577299,774.951076320939,777.886497064579,780.821917808219,783.757338551859,786.692759295499,789.628180039139,792.563600782779,795.499021526419,798.434442270059,801.369863013699,804.305283757339,807.240704500978,810.176125244618,813.111545988258,816.046966731898,818.982387475538,821.917808219178,824.853228962818,827.788649706458,830.724070450098,833.659491193738,836.594911937378,839.530332681018,842.465753424658,845.401174168298,848.336594911937,851.272015655577,854.207436399217,857.142857142857,860.078277886497,863.013698630137,865.949119373777,868.884540117417,871.819960861057,874.755381604697,877.690802348337,880.626223091976,883.561643835616,886.497064579256,889.432485322896,892.367906066536,895.303326810176,898.238747553816,901.174168297456,904.109589041096,907.045009784736,909.980430528376,912.915851272016,915.851272015656,918.786692759296,921.722113502935,924.657534246575,927.592954990215,930.528375733855,933.463796477495,936.399217221135,939.334637964775,942.270058708415,945.205479452055,948.140900195695,951.076320939335,954.011741682975,956.947162426614,959.882583170254,962.818003913894,965.753424657534,968.688845401174,971.624266144814,974.559686888454,977.495107632094,980.430528375734,983.365949119374,986.301369863014,989.236790606654,992.172211350294,995.107632093933,998.043052837573,1000.97847358121,1003.91389432485,1006.84931506849,1009.78473581213,1012.72015655577,1015.65557729941,1018.59099804305,1021.52641878669,1024.46183953033,1027.39726027397,1030.33268101761,1033.26810176125,1036.20352250489,1039.13894324853,1042.07436399217,1045.00978473581,1047.94520547945,1050.88062622309,1053.81604696673,1056.75146771037,1059.68688845401,1062.62230919765,1065.55772994129,1068.49315068493,1071.42857142857,1074.36399217221,1077.29941291585,1080.23483365949,1083.17025440313,1086.10567514677,1089.04109589041,1091.97651663405,1094.91193737769,1097.84735812133,1100.78277886497,1103.71819960861,1106.65362035225,1109.58904109589,1112.52446183953,1115.45988258317,1118.39530332681,1121.33072407045,1124.26614481409,1127.20156555773,1130.13698630137,1133.07240704501,1136.00782778865,1138.94324853229,1141.87866927593,1144.81409001957,1147.74951076321,1150.68493150685,1153.62035225049,1156.55577299413,1159.49119373777,1162.42661448141,1165.36203522505,1168.29745596869,1171.23287671233,1174.16829745597,1177.10371819961,1180.03913894325,1182.97455968689,1185.90998043053,1188.84540117417,1191.78082191781,1194.71624266145,1197.65166340509,1200.58708414873,1203.52250489237,1206.45792563601,1209.39334637965,1212.32876712329,1215.26418786693,1218.19960861057,1221.13502935421,1224.07045009785,1227.00587084149,1229.94129158513,1232.87671232877,1235.81213307241,1238.74755381605,1241.68297455969,1244.61839530333,1247.55381604697,1250.48923679061,1253.42465753425,1256.36007827789,1259.29549902153,1262.23091976517,1265.16634050881,1268.10176125245,1271.03718199609,1273.97260273973,1276.90802348337,1279.84344422701,1282.77886497065,1285.71428571429,1288.64970645793,1291.58512720157,1294.52054794521,1297.45596868885,1300.39138943249,1303.32681017613,1306.26223091977,1309.19765166341,1312.13307240705,1315.06849315068,1318.00391389432,1320.93933463796,1323.8747553816,1326.81017612524,1329.74559686888,1332.68101761252,1335.61643835616,1338.5518590998,1341.48727984344,1344.42270058708,1347.35812133072,1350.29354207436,1353.228962818,1356.16438356164,1359.09980430528,1362.03522504892,1364.97064579256,1367.9060665362,1370.84148727984,1373.77690802348,1376.71232876712,1379.64774951076,1382.5831702544,1385.51859099804,1388.45401174168,1391.38943248532,1394.32485322896,1397.2602739726,1400.19569471624,1403.13111545988,1406.06653620352,1409.00195694716,1411.9373776908,1414.87279843444,1417.80821917808,1420.74363992172,1423.67906066536,1426.614481409,1429.54990215264,1432.48532289628,1435.42074363992,1438.35616438356,1441.2915851272,1444.22700587084,1447.16242661448,1450.09784735812,1453.03326810176,1455.9686888454,1458.90410958904,1461.83953033268,1464.77495107632,1467.71037181996,1470.6457925636,1473.58121330724,1476.51663405088,1479.45205479452,1482.38747553816,1485.3228962818,1488.25831702544,1491.19373776908,1494.12915851272,1497.06457925636,1500],
        "density": [6.35226971318358e-17,5.89347255335714e-17,3.36292944337688e-19,0,0,0,0,0,0,0,0,0,0,0,2.78357109326768e-19,1.07022781999209e-18,2.6053676209894e-18,6.4251738201049e-18,8.19349512517777e-18,2.18114881048459e-17,3.9207556637558e-16,3.80424645863245e-15,3.35584308749601e-14,2.72025135283609e-13,2.03560603533278e-12,1.4055647686799e-11,8.95637468361202e-11,5.26796608286408e-10,2.8610591691864e-09,1.43541297608089e-08,6.65654161045392e-08,2.85545779755096e-07,1.13419189502433e-06,4.17658066422017e-06,1.42804985245206e-05,4.54201610861926e-05,0.000134664204482512,0.000373043199771152,0.000967847605725248,0.00245813822557525,0.00583484318467609,0.0128654593662057,0.0263815941192649,0.0503771369273614,0.0897162746092665,0.149256610602052,0.232385816649311,0.339281763690413,0.465510932694156,0.601684676049522,0.734655085363977,0.850173773378365,0.936277939443951,0.986241255943726,1,0.983561331880577,0.946742186185272,0.90023179086102,0.853724248037009,0.812788285223378,0.779896112516635,0.755284966135973,0.737814108509251,0.725692811402234,0.716985763163891,0.709908133074272,0.702966390814838,0.695007756480158,0.685230332652835,0.673186189622762,0.658785079531756,0.642283736978647,0.624234993400908,0.605379873122541,0.586492267661689,0.568255979640189,0.551056724761556,0.534952293607322,0.519824699677021,0.505478281569386,0.491737884251853,0.478501224483342,0.465737043419359,0.453442297179345,0.441585340467403,0.430065111255463,0.418708347158292,0.407310095196811,0.395702703595861,0.383823172567175,0.371746042033385,0.359662324841151,0.347809953022048,0.336402724209171,0.325525007604051,0.315118610347969,0.30507539671997,0.295288154047553,0.285698826693092,0.276317285245142,0.267211828771061,0.258481266484135,0.250220125206575,0.242487053054561,0.235284757575455,0.22855785459033,0.222211218523702,0.216145176284573,0.210297007052221,0.204674194978,0.199366379979891,0.194546802627562,0.190417761524609,0.187098524657865,0.184633510346799,0.182947912770073,0.181849120600157,0.181056597643733,0.180252612307437,0.179140700297366,0.17749710617669,0.175202986954084,0.172250802793539,0.168725333677905,0.164766395624214,0.160525027035162,0.156126309522428,0.151649178112059,0.147126939863698,0.14256347360832,0.137958919486106,0.133334897809222,0.128738266863588,0.124241248238832,0.119931472764554,0.115895164027517,0.112196994278467,0.108862805444557,0.105871838690986,0.103161949963126,0.100645949789169,0.0982328380875244,0.0958467303308961,0.0934387120758621,0.0909905616010761,0.0885117962699894,0.0860320879393076,0.0835919134834506,0.0812357046234594,0.0789903140864739,0.0768735341778129,0.0748911861014793,0.0730326182429715,0.0712620768106359,0.0695114250415689,0.0676830970696328,0.0656694390393834,0.0633863413327339,0.0608098443425031,0.0579998115771176,0.0550980234028969,0.0522980274323315,0.0497959204747486,0.0477390887476661,0.0461902763010632,0.0451192704939449,0.0444248773399017,0.0439256207146168,0.0434723224540502,0.0429434322198024,0.0422508500378349,0.0413340674468347,0.0401525712349987,0.0386847641839281,0.036934883942076,0.0349420720312011,0.0327826502041501,0.0305597876438109,0.0283821334558551,0.0263400456287116,0.0244903528852863,0.0228565884622915,0.0214435943574164,0.0202579452460252,0.0193404974630658,0.0187206642623297,0.0184375246066221,0.0185057858332403,0.0188970252192351,0.0195336143252403,0.0202972870447186,0.0210496724334987,0.0216581102200533,0.0220188342874597,0.0220714586876291,0.0218025944576286,0.0212404541001861,0.0204446267191424,0.0194949939483367,0.0184815955149174,0.0174948178246312,0.0166143407833896,0.0159060888279043,0.0153810477460191,0.0150123530762447,0.0147440056291413,0.0145061916031872,0.0142350841411731,0.0138887184071167,0.0134543351674925,0.0129465982954945,0.0123995679869617,0.0118565809648407,0.0113611585727855,0.0109500132012453,0.0106477716481463,0.0104630158202924,0.0103862133501091,0.0103908145543827,0.0104382640383441,0.0104843317402116,0.0104902837668824,0.0104345757124364,0.0103117746860408,0.0101312045626307,0.00991222649727529,0.00967737741315363,0.00944530196868461,0.00922569268138157,0.0090178363714754,0.00881299310113931,0.00859938908528475,0.00836781393040237,0.00811594352069026,0.00785024954521202,0.0075851347208239,0.0073394376561985,0.00713087687400409,0.0069713746051776,0.00685638849541083,0.00676753948795112,0.00668059197335278,0.00657253061373921,0.00642930382176145,0.00625040136073347,0.00604905451864727,0.00584842632011186,0.00567524436008526,0.00555280384388081,0.00549523155428967,0.00550444239578878,0.00557040403247392,0.00567430220818831,0.00579327330977899,0.00590491286548685,0.00599001804793224,0.00603117872910205,0.00601373677809526,0.00592699134188345,0.00576186824199045,0.00551659450587425,0.00520141070314101,0.00484053332124929,0.00446912964861468,0.00412543678934031,0.00384068318072874,0.00363070689954591,0.00349244929051356,0.00340630623752166,0.0033428971184393,0.00327142308982506,0.0031669551708057,0.00301523687455771,0.00281482188406095,0.00257641129527161,0.00232267397231022,0.00207898144551435,0.0018638409415494,0.00168468004849233,0.00153662452803452,0.001406460518652,0.0012800919489299,0.00115015977449602,0.00102052198202348,0.000905834098467227,0.000826601455857571,0.000801759053822521,0.000841461149905034,0.000942342406638483,0.00108650330611437,0.00124439948874442,0.0013809564281612,0.0014622923192812,0.0014639395052124,0.00138641632519052,0.00124529205317581,0.00106944820383378,0.000893848031081887,0.00075138485218714,0.000665838141809112,0.000647309273219655,0.000690742269591091,0.000777555364281979,0.000880007392288252,0.000967522815722946,0.0010137114567783,0.00100239805478205,0.000930958082735392,0.000809903514022813,0.000658891414234601,0.000500768798795168,0.000356808698798464,0.000238787595809125,0.000150691478189236,9.10797500095618e-05,5.58641573128677e-05,4.08400668368131e-05,4.33737662168267e-05,6.30440611546537e-05,0.000101295754640938,0.000160330154942639,0.000241606832584331,0.000344468143624598,0.00046543947992186,0.000598589219032945,0.000736915806098455,0.00087419169455023,0.00100631577591485,0.00113127928361347,0.00124681551014269,0.00134914942672165,0.00143019999098642,0.00147907350035419,0.00148549205169565,0.00144437062903009,0.00135960973213096,0.00124532297107114,0.00112372536755992,0.00102030730704179,0.000958023417333397,0.00095248811033033,0.0010094962233148,0.0011250063571658,0.00128675322891571,0.00147646385352659,0.0016722580758363,0.00185159017160006,0.00199242983974928,0.00208563174435192,0.00213170536725386,0.00213871780606444,0.00211677515730291,0.00207187752297994,0.00200260975568591,0.00190143141785529,0.00175978876677625,0.00157428278960283,0.00135074947101821,0.0011043698823369,0.000855977343176029,0.000626430806384712,0.000431496200408156,0.000279042492206919,0.000169058781418685,9.57902061016391e-05,5.1648224695214e-05,2.64018762263348e-05,1.29902537789546e-05,6.79993838782814e-06,5.24350797995901e-06,7.4963378945723e-06,1.42538268421234e-05,2.75093470369901e-05,5.02102158173295e-05,8.5595774698929e-05,0.000136103014638021,0.000201948698682042,0.000279796475625759,0.000362146642789289,0.000438068266951952,0.000495521886841974,0.000524866240850491,0.000522486319111213,0.000492721876260679,0.000451609353257223,0.000420047405450684,0.000419914030500443,0.000470319420290722,0.000583714700887832,0.000762614500101093,0.000997277736640484,0.00126502823267592,0.00153211127825297,0.00175867834178016,0.0019065505129783,0.0019481316426237,0.00187385142080909,0.00169546410022499,0.00144368895633202,0.00116070017739882,0.0008899373834423,0.000669091851542786,0.000518519272292724,0.000438929555647969,0.000419443491251201,0.000440829353199513,0.000480571971538728,0.000517891785736536,0.000538056922522572,0.000535163344595632,0.000512610744780147,0.0004809782380023,0.000453792728167151,0.000442449639289457,0.00045193428303448,0.000478802775785413,0.000512148393031487,0.00053724153986846,0.000540546321863898,0.000513427391888514,0.000456912789125077,0.000380631554635483,0.0002965152550878,0.000216013053898324,0.000147466788044415,9.5229979537093e-05,6.03608206975007e-05,4.22406878794167e-05,4.03642646094863e-05,5.56846744633463e-05,9.11072411478167e-05,0.000150920104968377,0.000239151630437428,0.000357127834047986,0.000500889153999921,0.000659497658412738,0.000815367754854114,0.000946333133774199,0.00103140313274051,0.00106249492883084,0.00104261524304414,0.000985408401076581,0.000909955650062446,0.000833971496311614,0.000768209983216378,0.000714211910726868,0.000665933205999705,0.000614106579940482,0.000551179867970901,0.000474725466984017,0.000388177116588977,0.000299070046151727,0.000215984043016902,0.000145689278865986,9.15623351849066e-05,5.37370102455165e-05,2.9885268182286e-05,1.58023235764798e-05,8.44176665097964e-06,5.73394505201536e-06,6.82706848204954e-06,1.21534055508004e-05,2.33859668321851e-05,4.32241446421983e-05,7.48628159927491e-05,0.000121027277691207,0.000182627503545647,0.00025735859161479,0.000338823599472624,0.000416806744210726,0.000479048898911207,0.000514293497703009,0.000515706796785827,0.000483198460950938,0.000424275093464707,0.00035486908310945,0.000290841997803169,0.000246698910240732,0.000233477799792227,0.000257744854086637,0.000321409210345647,0.000422012460629237,0.000553271249965566,0.000705749299448393,0.00086755004802744,0.00102495619620309,0.00116311213257799,0.00126710345853604,0.00132389040649965,0.00132521996591299,0.0012708498222287,0.00117055837602249,0.00104341072560447,0.000915780077957832,0.000807256126279077,0.00072789232538552,0.000676441943962369,0.000643027662118371,0.000615073314641329,0.000584222035735161,0.000551904660502865,0.000531963304546982,0.000549706418543213,0.000637475465398848,0.000827139347758361,0.0011402404022065,0.001577275513487,0.002108924023266,0.00267328275750711,0.00318301962906759,0.00353087892182531,0.00364922915015015]
    }
  },
  "ENCODE PE refernce": {
    "data information": {
        "pipe version": "V3",
        "Docker tag": "target",
        "genome": "mm10",
        "read type": "Paired-end data"
    },
    "mapping stats": {
        "alignment program": "bwa",
        "alignment program version": "0.7.16a",
        "alignment program parameters": "bwa men",
        "post alignment program": "methylQA",
        "post alignment program version": "0.1.9",
        "post alignment program parameters": "methylQA atac",
        "total reads": [53521173,52841837,49568333,52179809,49691764,51407232,35924683,48416233,43503968,53935170,43919645,42278369,47548519,41466599,86375299,48785458,52082703,53078621,44189469,42364518,44562754,53140917,40755321,83791512,57818671,55554407,58056975,56463898,49454428,44646781,42044382,49443834,46776162,38328988,38505907,68272995,66315169,48348502,70091736,54588699,64152873,51902255,74018175,53219421,55307973,51449827,60200454,43550852,52300091,37376936,47681374,42220415,63001963,55360933],
        "mapped reads": [43153580,42352477,40229473,42084338,40291437,42716896,28866333,39886059,34766414,43002187,35234920,34848824,39069214,34125943,69416398,38266364,41765449,42472011,35204142,33813586,39790102,48179030,36332407,71257866,49597633,47494669,49211981,47609742,40952588,36620751,33314063,39567448,35867421,30385187,29796011,56853075,55132909,39816744,55306693,42147170,49206590,40035934,63486809,44917615,47228932,44222865,44153141,32173136,39219035,26981011,34913406,30567779,53595288,45140181],
        "uniquely mapped reads": [42735187,41950396,39892521,41671318,40023928,42419895,28655248,39664818,34533848,42699479,35029567,34684686,38882460,33902845,68757933,37885873,41382639,42061841,34913489,33524222,39513192,47902342,36053467,70701654,49250461,47163021,48894920,47293755,40607252,36297159,33036123,39224311,35600242,30109011,29557977,56293216,54708676,39509001,54921964,41772135,48755362,39678322,62946399,44506281,46848675,43877034,43882564,31955516,38963822,26790046,34708259,30315741,53112493,44697439],
        "non-redundant mapped reads": [39045290,38027740,36822477,37914795,35681662,38482560,25640256,35563680,30468442,35964313,29983078,29486250,34677104,28328824,59970088,33388823,37659611,37990545,31206803,30136814,35594598,42508046,32708309,56716944,43786201,41405826,42048361,39994718,33434773,29290122,29440814,33946966,31312483,27073004,25517372,45645909,41507394,29033906,38777600,27948067,41966430,34194715,55550516,39160672,40919632,38422470,38791422,29171658,35229878,23537123,29178926,25560630,48237836,38811180],
        "useful reads": [38286495,37046058,36092973,37322817,34664807,37588382,25198225,34770694,29541806,34877663,28883250,28465741,33727855,27478975,58755388,32416527,36901151,37180635,30266809,29333834,34757288,41636024,32125668,55044789,42760084,40230858,40522043,38435668,32166278,27815309,28378414,32719725,30043071,26312383,24306859,44010703,39473963,27272092,36609370,25903627,40664825,32947367,54382844,38030358,39852634,37534831,37743991,28338484,34346943,22692393,28743123,24922703,47262684,37207722],
        "useful single ends": [76572990,74092116,72185946,74645634,69329614,75176764,50396450,69541388,59083612,69755326,57766500,56931482,67455710,54957950,117510776,64833054,73802302,74361270,60533618,58667668,69514576,83272048,64251336,110089578,85520168,80461716,81044086,76871336,64332556,55630618,56756828,65439450,60086142,52624766,48613718,88021406,78947926,54544184,73218740,51807254,81329650,65894734,108765688,76060716,79705268,75069662,75487982,56676968,68693886,45384786,57486246,49845406,94525368,74415444]
    },
    "library complexity": {
        "after alignment PCR duplicates percentage": [0.0669999999999999,0.0590000000000001,0.0580000000000001,0.077,0.071,0.0649999999999999,0.096,0.081,0.081,0.117,0.092,0.105,0.074,0.134,0.098,0.083,0.071,0.075,0.071,0.074,0.071,0.088,0.079,0.124,0.083,0.082,0.075,0.081,0.123,0.111,0.0590000000000001,0.078,0.054,0.0669999999999999,0.0639999999999999,0.11,0.115,0.136,0.155,0.179,0.09,0.083,0.087,0.079,0.092,0.098,0.081,0.0580000000000001,0.069,0.086,0.153,0.141,0.0639999999999999,0.056]
    },
    "peak analysis": {
        "peak calling software": "macs2",
        "peak calling parameters": "--keep-dup 1000 --nomodel --shift 0 --extsize 150",
        "peak threshold parameter": "qvaule",
        "peak threshold": 0.01,
        "reads percentage under peaks": [0.1292,0.1194,0.1715,0.0954,0.1865,0.2143,0.1892,0.2739,0.1869,0.1951,0.2468,0.3124,0.376,0.2318,0.1301,0.1031,0.1242,0.1263,0.1443,0.1407,0.1777,0.2005,0.1508,0.1709,0.2131,0.2143,0.251,0.2289,0.1848,0.151,0.1377,0.1413,0.1771,0.1138,0.1571,0.1233,0.2416,0.1962,0.4163,0.3119,0.2875,0.319,0.1761,0.1324,0.183,0.1939,0.1985,0.1781,0.1754,0.1624,0.1951,0.1016,0.1347,0.1694],
        "reads number under peaks": [9811438,8774097,12265101,7065600,12796830,15947809,9432387,18834750,10926114,13473224,14096158,17550145,24926840,12577431,15169277,6629860,9084049,9307498,8645913,8176337,12230668,16525586,9593749,18636859,18014767,17054844,20096977,17386923,11681493,8269024,7742949,9158421,10534062,5929255,7531003,10730541,18703706,10522241,29572680,15697637,23050218,20696530,18984054,9978365,14435791,14406726,14822352,9985987,11925204,7290002,11093907,5020171,12607822,12463879],
        "peaks number in promoter regions": [14477,14145,14868,13733,14744,15237,14200,15584,14510,15211,15167,15650,16473,15521,14686,13440,14154,14226,14242,14038,15208,15512,14874,16104,16799,16911,17311,16685,14850,13967,15366,15635,16277,15258,13886,13856,13595,13099,15925,14592,17238,17159,15520,14358,15490,15269,14747,14510,14806,13866,14716,13077,15707,16417],
        "peaks number in non-promoter regions": [33335,30617,43721,24189,50064,53274,37693,63859,43847,52738,59340,68210,86462,57548,37472,24065,31615,32290,31700,29608,47013,55366,42303,57261,57169,60123,67570,59511,43994,36843,40786,43070,53779,34782,31055,28790,33074,27953,60339,45326,78165,74463,47085,31465,48264,46018,44445,35400,40301,28548,39066,18454,46668,54210]
    },
    "enrichment": {
        "enrichment ratio in coding promoter regions": [14.136,12.296,16.16,8.18,8.513,14.933,8.581,9.32,11.5,12.383,10.257,11.688,11.221,12.094,6.971,12.52,8.317,10.669,8.456,11.689,11.863,11.185,17.456,21.05,11.468,11.929,6.977,10.024,9.969,12.054,6.788,20.625,8.156,11.148,8.239,9.982,9.362,14.347,9.821,10.313,13.651,13.208,10.01,25.296,11.727,8.301,13.642,8.733,7.846,11.113,7.224,8.14,13.448,16.25],
        "subsampled 10M enrichment ratio": [20.0751960291,16.9365522834,28.5592416042,16.5750076566,15.6160587689,17.8926912918,17.2628079078,17.9767092513,17.5390101683,17.6032387948,19.2296282833,17.7392147705,16.9579954453,16.8918353327,14.9166314269,18.8505432093,18.0756918468,16.4321073588,15.5357255478,17.426875664,17.7421222561,16.8158703756,20.0085220044,22.2452856369,16.2795459894,18.5311481308,15.9968380655,18.0918133729,16.522756908,17.2040802699,14.5428255822,27.2038806667,14.4630142898,16.2649026692,14.8475900548,16.4251850656,16.1057058162,18.1814386273,16.9892634495,15.9255873558,24.954998221,19.210203775,16.1552163426,29.8046802599,17.1783351364,14.5727165738,18.7300320681,15.4182600148,14.7647221963,17.2786818249,14.2266656533,14.67821709,19.4827391372,21.3672015923],
        "percentage of background RPKM larger than 0.3777": [0.1912,0.2199,0.1426,0.2792,0.0829,0.0754,0.1392,0.0408,0.0754,0.0573,0.0376,0.02,0.0152,0.0591,0.2146,0.2441,0.1914,0.2066,0.1376,0.1606,0.0615,0.0422,0.1621,0.0699,0.0533,0.0491,0.0281,0.0433,0.1091,0.1455,0.1327,0.1118,0.0856,0.1363,0.16,0.2046,0.0866,0.106,0.0265,0.1336,0.069,0.0542,0.1241,0.1873,0.1068,0.0887,0.0587,0.0855,0.0722,0.1198,0.0634,0.2114,0.1007,0.1295]
    }
  }
} 
