{
  "Sample_QC_info": {
    "data_information": {
        "file_name": "3.oLT_1",
        "genome": "hg38",
        "read_type": "Paired-end data",
        "pipe_version": "v1.00",
        "Docker_image_id": "sha256:8896f8f11c355df12838687e195d59aa152c56ecbbc891cbd404da81abc758a3",
        "bash_script_MD5": "f281c99b69baed5d8e94154dbcf0ad16",
        "running_time": "Fri_Oct__4_00:18:30_CDT_2019"
    },
    "pre_alignment_stats": {
        "program1": "cutadapt",
        "program1_version": "1.16",
        "written_reads_by_cutadapt": 75123674,
        "program2": "FastQC",
        "program2_version": "0.11.7"
    },
    "mapping_stats": {
        "alignment_program": "bwa",
        "alignment_program_version": "0.7.16a",
        "alignment_program_parameters": "bwa mem",
        "post_alignment_program": "methylQA",
        "post_alignment_program_version": "0.2.1",
        "post_alignment_program_parameters": "methylQA atac",
        "total_reads": 78457133,
        "mapped_reads": 55042546,
        "uniquely_mapped_reads": 47938608,
        "non-redundant_mapped_reads": 45920548,
        "useful_single_ends": 91841096
    },
    "library_complexity": {
        "before_alignment_library_duplicates_percentage": 0.2629,
        "after_alignment_PCR_duplicates_percentage": 0.043
    },
    "insertion_size_distribution": {
        "insertion_size": [0,0.978473581213307,1.95694716242661,2.93542074363992,3.91389432485323,4.89236790606654,5.87084148727984,6.84931506849315,7.82778864970646,8.80626223091977,9.78473581213307,10.7632093933464,11.7416829745597,12.720156555773,13.6986301369863,14.6771037181996,15.6555772994129,16.6340508806262,17.6125244618395,18.5909980430528,19.5694716242661,20.5479452054795,21.5264187866928,22.5048923679061,23.4833659491194,24.4618395303327,25.440313111546,26.4187866927593,27.3972602739726,28.3757338551859,29.3542074363992,30.3326810176125,31.3111545988258,32.2896281800391,33.2681017612524,34.2465753424658,35.2250489236791,36.2035225048924,37.1819960861057,38.160469667319,39.1389432485323,40.1174168297456,41.0958904109589,42.0743639921722,43.0528375733855,44.0313111545988,45.0097847358121,45.9882583170254,46.9667318982387,47.945205479452,48.9236790606654,49.9021526418787,50.880626223092,51.8590998043053,52.8375733855186,53.8160469667319,54.7945205479452,55.7729941291585,56.7514677103718,57.7299412915851,58.7084148727984,59.6868884540117,60.665362035225,61.6438356164384,62.6223091976517,63.600782778865,64.5792563600783,65.5577299412916,66.5362035225049,67.5146771037182,68.4931506849315,69.4716242661448,70.4500978473581,71.4285714285714,72.4070450097847,73.385518590998,74.3639921722113,75.3424657534246,76.320939334638,77.2994129158513,78.2778864970646,79.2563600782779,80.2348336594912,81.2133072407045,82.1917808219178,83.1702544031311,84.1487279843444,85.1272015655577,86.105675146771,87.0841487279843,88.0626223091976,89.041095890411,90.0195694716243,90.9980430528376,91.9765166340509,92.9549902152642,93.9334637964775,94.9119373776908,95.8904109589041,96.8688845401174,97.8473581213307,98.825831702544,99.8043052837573,100.782778864971,101.761252446184,102.739726027397,103.718199608611,104.696673189824,105.675146771037,106.65362035225,107.632093933464,108.610567514677,109.58904109589,110.567514677104,111.545988258317,112.52446183953,113.502935420744,114.481409001957,115.45988258317,116.438356164384,117.416829745597,118.39530332681,119.373776908023,120.352250489237,121.33072407045,122.309197651663,123.287671232877,124.26614481409,125.244618395303,126.223091976517,127.20156555773,128.180039138943,129.158512720157,130.13698630137,131.115459882583,132.093933463796,133.07240704501,134.050880626223,135.029354207436,136.00782778865,136.986301369863,137.964774951076,138.94324853229,139.921722113503,140.900195694716,141.87866927593,142.857142857143,143.835616438356,144.814090019569,145.792563600783,146.771037181996,147.749510763209,148.727984344423,149.706457925636,150.684931506849,151.663405088063,152.641878669276,153.620352250489,154.598825831703,155.577299412916,156.555772994129,157.534246575342,158.512720156556,159.491193737769,160.469667318982,161.448140900196,162.426614481409,163.405088062622,164.383561643836,165.362035225049,166.340508806262,167.318982387476,168.297455968689,169.275929549902,170.254403131115,171.232876712329,172.211350293542,173.189823874755,174.168297455969,175.146771037182,176.125244618395,177.103718199609,178.082191780822,179.060665362035,180.039138943249,181.017612524462,181.996086105675,182.974559686888,183.953033268102,184.931506849315,185.909980430528,186.888454011742,187.866927592955,188.845401174168,189.823874755382,190.802348336595,191.780821917808,192.759295499022,193.737769080235,194.716242661448,195.694716242661,196.673189823875,197.651663405088,198.630136986301,199.608610567515,200.587084148728,201.565557729941,202.544031311155,203.522504892368,204.500978473581,205.479452054795,206.457925636008,207.436399217221,208.414872798434,209.393346379648,210.371819960861,211.350293542074,212.328767123288,213.307240704501,214.285714285714,215.264187866928,216.242661448141,217.221135029354,218.199608610568,219.178082191781,220.156555772994,221.135029354207,222.113502935421,223.091976516634,224.070450097847,225.048923679061,226.027397260274,227.005870841487,227.984344422701,228.962818003914,229.941291585127,230.91976516634,231.898238747554,232.876712328767,233.85518590998,234.833659491194,235.812133072407,236.79060665362,237.769080234834,238.747553816047,239.72602739726,240.704500978474,241.682974559687,242.6614481409,243.639921722113,244.618395303327,245.59686888454,246.575342465753,247.553816046967,248.53228962818,249.510763209393,250.489236790607,251.46771037182,252.446183953033,253.424657534247,254.40313111546,255.381604696673,256.360078277886,257.3385518591,258.317025440313,259.295499021526,260.27397260274,261.252446183953,262.230919765166,263.20939334638,264.187866927593,265.166340508806,266.14481409002,267.123287671233,268.101761252446,269.080234833659,270.058708414873,271.037181996086,272.015655577299,272.994129158513,273.972602739726,274.951076320939,275.929549902153,276.908023483366,277.886497064579,278.864970645793,279.843444227006,280.821917808219,281.800391389432,282.778864970646,283.757338551859,284.735812133072,285.714285714286,286.692759295499,287.671232876712,288.649706457926,289.628180039139,290.606653620352,291.585127201566,292.563600782779,293.542074363992,294.520547945205,295.499021526419,296.477495107632,297.455968688845,298.434442270059,299.412915851272,300.391389432485,301.369863013699,302.348336594912,303.326810176125,304.305283757339,305.283757338552,306.262230919765,307.240704500978,308.219178082192,309.197651663405,310.176125244618,311.154598825832,312.133072407045,313.111545988258,314.090019569472,315.068493150685,316.046966731898,317.025440313112,318.003913894325,318.982387475538,319.960861056751,320.939334637965,321.917808219178,322.896281800391,323.874755381605,324.853228962818,325.831702544031,326.810176125245,327.788649706458,328.767123287671,329.745596868885,330.724070450098,331.702544031311,332.681017612524,333.659491193738,334.637964774951,335.616438356164,336.594911937378,337.573385518591,338.551859099804,339.530332681018,340.508806262231,341.487279843444,342.465753424658,343.444227005871,344.422700587084,345.401174168297,346.379647749511,347.358121330724,348.336594911937,349.315068493151,350.293542074364,351.272015655577,352.250489236791,353.228962818004,354.207436399217,355.18590998043,356.164383561644,357.142857142857,358.12133072407,359.099804305284,360.078277886497,361.05675146771,362.035225048924,363.013698630137,363.99217221135,364.970645792564,365.949119373777,366.92759295499,367.906066536204,368.884540117417,369.86301369863,370.841487279843,371.819960861057,372.79843444227,373.776908023483,374.755381604697,375.73385518591,376.712328767123,377.690802348337,378.66927592955,379.647749510763,380.626223091976,381.60469667319,382.583170254403,383.561643835616,384.54011741683,385.518590998043,386.497064579256,387.47553816047,388.454011741683,389.432485322896,390.41095890411,391.389432485323,392.367906066536,393.346379647749,394.324853228963,395.303326810176,396.281800391389,397.260273972603,398.238747553816,399.217221135029,400.195694716243,401.174168297456,402.152641878669,403.131115459883,404.109589041096,405.088062622309,406.066536203523,407.045009784736,408.023483365949,409.001956947162,409.980430528376,410.958904109589,411.937377690802,412.915851272016,413.894324853229,414.872798434442,415.851272015656,416.829745596869,417.808219178082,418.786692759295,419.765166340509,420.743639921722,421.722113502935,422.700587084149,423.679060665362,424.657534246575,425.636007827789,426.614481409002,427.592954990215,428.571428571429,429.549902152642,430.528375733855,431.506849315068,432.485322896282,433.463796477495,434.442270058708,435.420743639922,436.399217221135,437.377690802348,438.356164383562,439.334637964775,440.313111545988,441.291585127202,442.270058708415,443.248532289628,444.227005870841,445.205479452055,446.183953033268,447.162426614481,448.140900195695,449.119373776908,450.097847358121,451.076320939335,452.054794520548,453.033268101761,454.011741682975,454.990215264188,455.968688845401,456.947162426614,457.925636007828,458.904109589041,459.882583170254,460.861056751468,461.839530332681,462.818003913894,463.796477495108,464.774951076321,465.753424657534,466.731898238748,467.710371819961,468.688845401174,469.667318982387,470.645792563601,471.624266144814,472.602739726027,473.581213307241,474.559686888454,475.538160469667,476.516634050881,477.495107632094,478.473581213307,479.452054794521,480.430528375734,481.409001956947,482.38747553816,483.365949119374,484.344422700587,485.3228962818,486.301369863014,487.279843444227,488.25831702544,489.236790606654,490.215264187867,491.19373776908,492.172211350294,493.150684931507,494.12915851272,495.107632093933,496.086105675147,497.06457925636,498.043052837573,499.021526418787,500],
        "density": [2.86545936894299e-05,4.99768158971549e-05,8.53362389176624e-05,0.000143982293768857,0.00024402873651804,0.000405006512957582,0.000658447892917902,0.00104902419991585,0.00163846800464027,0.00251003301505104,0.0037733435117551,0.00556940401871289,0.00807545286567342,0.0115966451245446,0.0164568337898753,0.0229247672492266,0.0313619763086715,0.0421544488324972,0.0556968289631595,0.072372057227535,0.0925270040075234,0.116445036880908,0.144316860639131,0.176617042916958,0.212863108646532,0.252617236677483,0.295365745996112,0.340436771765457,0.387027609978452,0.434243628920237,0.481146809333707,0.526811181068589,0.570347325439591,0.6106480488204,0.647530280607893,0.680796421691209,0.710483769713324,0.736847882799048,0.760328855876241,0.781503129973205,0.801024349643742,0.819557532435337,0.837718831734266,0.856047161847163,0.87477344587268,0.893878975146221,0.913126244817018,0.932078731912915,0.950136157902317,0.96658202163356,0.980639562234446,0.991531841272637,0.998156945320097,1,0.996893433275917,0.988682339012278,0.975402423889222,0.957266824648057,0.93464316171686,0.908023493374938,0.877989995357829,0.845179217315127,0.810090340337454,0.773679772535606,0.736544338139201,0.699200923993589,0.662099078841992,0.625618713959966,0.59007109938687,0.555702303864928,0.522698302492463,0.491233456882421,0.461518969770294,0.433427745545946,0.406957725373509,0.38208349143994,0.358761512820695,0.336934835474618,0.316537165926058,0.297496317417959,0.279737009427736,0.263252961041766,0.247957002860521,0.233696670003572,0.220402371826516,0.208007648394506,0.196449416927894,0.185668156984631,0.175608041683551,0.16621701352391,0.157446797688452,0.149304829683139,0.141704795895108,0.134593160332349,0.127936834417482,0.12170541113687,0.115870944991907,0.11040776245586,0.105292302749799,0.100502984227587,0.0960216436009572,0.0918617887462477,0.0879698504471909,0.0843316428598099,0.080934204360192,0.077765642569352,0.0748149877463387,0.0720720623659041,0.0695273736824594,0.0671720348036387,0.0650048554191605,0.0630246784916688,0.0612087443183491,0.0595508738169079,0.0580456472679577,0.0566884674105127,0.0554755986860939,0.0544041716270483,0.0534721442395166,0.0526782159230055,0.0520323381903715,0.0515307258510296,0.0511662523567574,0.0509389367862541,0.0508487937728405,0.0508959118158128,0.0510806257654626,0.0514037655797641,0.0518669501243732,0.0524728819396063,0.0532431158864096,0.0541699720227989,0.0552581152820048,0.0565148540910496,0.0579469846656129,0.059559866093792,0.0613564962526856,0.0633367013181024,0.0654965542951748,0.0678313251696923,0.0703407212792428,0.072990639600899,0.075765374803633,0.0786507817866266,0.0816361676669865,0.0847159896968512,0.0878911771998074,0.0911699173767668,0.0945677742748813,0.0981169317254064,0.101854297885559,0.105799361999057,0.109979730848486,0.114417641497022,0.119127322625811,0.124112971476007,0.129367544537188,0.134872504608001,0.140598603079663,0.146519465798817,0.152572316760626,0.158705517926488,0.164878122590239,0.171056347771408,0.177215882415058,0.183343267149461,0.189436269081251,0.195503250802281,0.201561608355874,0.207641994553874,0.213773522864232,0.219982345178401,0.226290255299455,0.232712577647324,0.239256677908544,0.245921107362698,0.252695376220645,0.259560319443668,0.266489797191503,0.273444433079655,0.280379001696089,0.28725276933274,0.294025361367641,0.300658313791583,0.307116358282171,0.313368393290705,0.319388110157349,0.32515425987358,0.330630403637824,0.335806822537516,0.340692532383162,0.34528266792176,0.349573176382956,0.353559792267045,0.357237160369751,0.360598172212651,0.363633567723895,0.366331837958889,0.368639770027201,0.370569607357384,0.372113881203569,0.373258224349533,0.373990015448078,0.374299004123245,0.374177717908276,0.373621636582819,0.372629143890912,0.37119532405825,0.369280575496489,0.366941248851442,0.364184654847809,0.361019275717312,0.357454742888924,0.353501903914787,0.349172944753473,0.344481531561139,0.339442936949062,0.334058778831159,0.328342894456055,0.322342474695885,0.316079806979317,0.309578227450172,0.302861861511238,0.295955357693023,0.288883624015821,0.2816715744077,0.274343891369202,0.26691945467941,0.259430045067788,0.251901844886315,0.244356194306176,0.236813413502513,0.229292771004326,0.221812466409506,0.214389620536827,0.207040266834171,0.199779339076585,0.192635066083924,0.185609721390008,0.178713393415431,0.171955731015,0.165345169202894,0.158888941115263,0.152593106427159,0.146462596360362,0.140501274621337,0.134717007150862,0.12912450009746,0.12370721092338,0.118465337774899,0.113398559453659,0.1085061202587,0.103786899471932,0.0992394633151723,0.0948620988549331,0.0906528310839925,0.0866199637174924,0.082760359204005,0.0790603963877327,0.0755169447272482,0.0721266737510527,0.0688861034771458,0.0657916623728992,0.0628397465936467,0.0600267739030367,0.0573492258821791,0.0548165602045939,0.0524153571824704,0.0501385950328473,0.0479830418261196,0.0459454504425347,0.0440225356365103,0.0422109629008339,0.0405073502201402,0.0389082820384966,0.0374110536986491,0.0360228833749373,0.0347281153906116,0.0335235282784486,0.0324060041904789,0.0313725355815101,0.0304202282364251,0.0295463021005441,0.0287480908798107,0.0280230408005678,0.0273716634836458,0.0267940683819411,0.0262819771697841,0.0258332456551534,0.0254457672149154,0.0251174491191618,0.0248461926643501,0.0246298801257049,0.0244663707791676,0.0243535072358198,0.0242927820733602,0.0242802114733515,0.0243113457717683,0.0243842284100452,0.0244969844265943,0.0246478070363259,0.0248349332270756,0.0250566119301584,0.0253110693535491,0.0255964767780429,0.0259139862749694,0.0262583157222075,0.0266269692673714,0.0270178223591094,0.027428764021338,0.0278577381707,0.0283027813904626,0.0287620536536306,0.0292338593925803,0.0297168662875419,0.03021027327041,0.0307117130472178,0.0312200890776637,0.0317343709028119,0.0322535649611492,0.0327766873124357,0.0333027398836292,0.0338306916563729,0.0343594659942606,0.0348878332899471,0.0354143315340473,0.0359377678886413,0.036456920543548,0.0369705903392683,0.0374776247420341,0.0379769397395675,0.0384675382167483,0.0389485237525247,0.0394191091886013,0.0398775106142429,0.0403237518919583,0.0407578064360278,0.0411793378957423,0.0415880765604547,0.0419838048805135,0.0423663439096868,0.0427355417368704,0.0430912649024128,0.0434333801241256,0.0437600206873683,0.0440728598799657,0.0443718560396323,0.0446570060489755,0.0449283468181259,0.045185950495143,0.045429912950695,0.0456603360925772,0.0458773055471633,0.046080367545807,0.0462687337706681,0.0464435041901052,0.0466044636406329,0.0467513400744342,0.0468838307032343,0.0470016314713355,0.0471044654955718,0.0471921063471498,0.0472643926037932,0.0473200984763813,0.0473594503991981,0.0473833230347439,0.0473917132992995,0.047384591683469,0.0473618918888915,0.0473235106362055,0.0472693173641192,0.0471991722612043,0.0471129499087437,0.0470087994666698,0.0468881616664429,0.0467514593139287,0.0465988613990487,0.0464305970740485,0.0462469368860822,0.0460481716984275,0.0458345919966874,0.045606469964555,0.0453638235957597,0.0451055016911536,0.0448332730562242,0.0445472494809172,0.0442475186956021,0.0439341513516751,0.0436072072680996,0.0432667410086099,0.0429128071769517,0.0425454660578144,0.0421641047957826,0.0417685087536803,0.0413598654493843,0.0409383838962442,0.0405043402387222,0.0400580853067743,0.0396000470724813,0.0391307271106489,0.0386506907558717,0.0381605513029796,0.0376601867930899,0.0371507955338761,0.0366333715826702,0.0361084764949351,0.0355766278497992,0.0350383054914561,0.0344939642858909,0.0339440512528139,0.033389024455067,0.0328293707214923,0.0322652055815049,0.0316976885056009,0.0311274792552952,0.0305552392025114,0.0299816375428561,0.0294073372200861,0.0288329845456702,0.0282592039325739,0.0276865983623017,0.0271158304897684,0.0265477590045108,0.0259828031033195,0.025421574807268,0.0248647003315132,0.0243128118371397,0.0237665345994838,0.023226471422007,0.0226931864072293,0.022167190310801,0.0216494752438848,0.0211404500771595,0.0206399076460256,0.0201480777606295,0.019665153135045,0.0191913025204195,0.0187266823066616,0.0182714456300602,0.01782574841532,0.0173897521780199,0.0169646602899893,0.0165499184906032,0.016145425505159,0.0157513330784046,0.0153677770055595,0.0149948724314647,0.0146327095802588,0.0142813500724424,0.013940824026459,0.0136112294146034,0.0132937102377177,0.0129868815983317,0.0126906349381993,0.0124048437040938,0.0121293703791683,0.0118640731846068,0.0116088116733626,0.0113634505331876,0.0111278610573391,0.010902351919896,0.0106871406059607,0.0104812816897207,0.0102846211693953,0.0100969797529441,0.00991814850923822,0.00974788708907653,0.00958592469589815,0.00943196371022842,0.00928568560429692,0.00914732408775062,0.00901622955630458,0.008891722539172,0.00877348539275004,0.00866121185874916,0.008554604724044,0.00845337074301016,0.00835721306232729,0.00826582144438481,0.00817886060912749,0.00809636585031064,0.00801738773874585,0.00794133050143975,0.00786754374617252,0.00779525658603709,0.00772355993532294,0.00765139091882587,0.00757752106878432,0.00750055023963355,0.00741874537182232,0.00732950067816255,0.00723141701393421,0.0071225571495393,0.00700101132243178,0.00686497435450907,0.00671282709139687,0.00654321755375337,0.00635513704570838,0.00614798653386363,0.00592050645183382,0.00567312443898422,0.00540828774871662,0.00512758773478973,0.00483304426181152,0.00452705300254681,0.0042123255744993,0.00389182492155899,0.00356869772080654,0.00324620492256367,0.00292842241090197,0.00261891050149065,0.00232057244861744]
    },
    "mapping_distribution": {
        "percentage_of_uniquely_mapped_reads_in_chrM": 0.2211,
        "percentage_of_non-redundant_uniquely_mapped_reads_in_chrX": 0.0476,
        "percentage_of_non-redundant_uniquely_mapped_reads_in_chrY": 0.0015,
        "Percentage_of_non-redundant_uniquely_mapped_reads_in_autosome": {"chr1": 0.0826, "chr2": 0.085, "chr3": 0.0694, "chr4": 0.0638, "chr5": 0.0624, "chr6": 0.0588, "chr7": 0.055, "chr8": 0.0518, "chr9": 0.0414, "chr10": 0.0491, "chr11": 0.0497, "chr12": 0.0473, "chr13": 0.0324, "chr14": 0.032, "chr15": 0.0294, "chr16": 0.031, "chr17": 0.0314, "chr18": 0.0273, "chr19": 0.0236, "chr20": 0.0257, "chr21": 0.014, "chr22": 0.0155}
    },
    "peak_analysis": {
        "peak_calling_software": "macs2",
        "peak_calling_parameters": "--keep-dup 1000 --nomodel --shift 0 --extsize 150",
        "peak_threshold_parameter": "qvaule",
        "peak_threshold": 0.01,
        "reads_percentage_under_peaks": 0.0866,
        "reads_number_under_peaks": 7920847,
        "peaks_number_in_promoter_regions": 15986,
        "peaks_number_in_non-promoter_regions": 63217
    },
    "saturation": {
        "sequence_depth": [5,10,20,30,40,50,60,70,80,90,100],
        "peaks_number": [5396,13440,26475,35698,43270,46582,52086,57534,67941,73551,79203],
        "percentage_of_peak_region_recaptured": [0.04,0.12,0.28,0.4,0.5,0.57,0.64,0.71,0.82,0.89,1]
    },
    "enrichment": {
        "enrichment_score_in_coding_promoter_regions": 3.72,
        "subsampled_10M_enrichment_score": 12.71,
        "percentage_of_background_RPKM_larger_than_0.3777": 0.1304
    },
    "yield_distribution": {
        "total_reads": [0,1e+06,2e+06,3e+06,4e+06,5e+06,6e+06,7e+06,8e+06,9e+06,1e+07,1.1e+07,1.2e+07,1.3e+07,1.4e+07,1.5e+07,1.6e+07,1.7e+07,1.8e+07,1.9e+07,2e+07,2.1e+07,2.2e+07,2.3e+07,2.4e+07,2.5e+07,2.6e+07,2.7e+07,2.8e+07,2.9e+07,3e+07,3.1e+07,3.2e+07,3.3e+07,3.4e+07,3.5e+07,3.6e+07,3.7e+07,3.8e+07,3.9e+07,4e+07,4.1e+07,4.2e+07,4.3e+07,4.4e+07,4.5e+07,4.6e+07,4.7e+07,4.8e+07,4.9e+07,5e+07,5.1e+07,5.2e+07,5.3e+07,5.4e+07,5.5e+07,5.6e+07,5.7e+07,5.8e+07,5.9e+07,6e+07,6.1e+07,6.2e+07,6.3e+07,6.4e+07,6.5e+07,6.6e+07,6.7e+07,6.8e+07,6.9e+07,7e+07,7.1e+07,7.2e+07,7.3e+07,7.4e+07,7.5e+07,7.6e+07,7.7e+07,7.8e+07,7.9e+07,8e+07,8.1e+07,8.2e+07,8.3e+07,8.4e+07,8.5e+07,8.6e+07,8.7e+07,8.8e+07,8.9e+07,9e+07,9.1e+07,9.2e+07,9.3e+07,9.4e+07,9.5e+07,9.6e+07,9.7e+07,9.8e+07,9.9e+07,1e+08],
        "expected_distinction": [0,780740,1537746.5,2289947,3038581,3784088,4526825.5,5266989.5,6004722.5,6740158.5,7473398,8204523.5,8933630.5,9660745.5,10385952,11109302,11830834,12550594,13268610,13984916.5,14699556.5,15412541,16123914,16833692,17541904.5,18248558.5,18953689,19657312,20359435.5,21060095,21759292,22457049,23153376.5,23848291.5,24541808.5,25233937,25924687.5,26614079.5,27302122.5,27988822.5,28674193,29358245,30040991,30722436.5,31402592.5,32081465.5,32759068.5,33435407.5,34110490.5,34784330,35456928,36128294,36798438,37467364,38135080.5,38801596.5,39466916,40131045,40793995,41455768.5,42116369.5,42775812,43434094,44091225,44747211,45402058,46055771,46708354,47359814.5,48010157,48659388.5,49307511,49954531,50600455.5,51245286,51889028.7,52531689.9,53173273.3,53813783.4,54453224.9,55091602.3,55728920.1,56365182.7,57000394.5,57634559.7,58267682.7,58899767.6,59530818.7,60160839.9,60789835.3,61417809,62044764.9,62670706.9,63295638.9,63919564.8,64542488.2,65164413.1,65785343,66405281.7,67024232.8,67642199.8],
        "lower_0.95_confidnece_interval": [0,776543.4,1529279.4,2277238.2,3021652.2,3762966,4501540.7,5237559.5,5971172.4,6702506,7431663,8158725.6,8883790.9,9606878.8,10328080.7,11047440.3,11764997.7,12480802.2,13194877.8,13907261.2,14617991.9,15327085.3,16034580.4,16740497.4,17444862.4,18147683.4,18848996,19548815.9,20247149.2,20944034.9,21639471.5,22333481.4,23026075.5,23717271,24407081.1,25095516.8,25782588.3,26468314,27152703.8,27835762.9,28517506.5,29197943.4,29877086.9,30554942.6,31231520.5,31906829.7,32580880.6,33253679,33925233.3,34595557.3,35264651.3,35932525.2,36599188.1,37264645.7,37928904.7,38591975.9,39253860.9,39914568.2,40574106.9,41232480.3,41889693.5,42545759.1,43200674.8,43854451.1,44507092.9,45158607.1,45808997.8,46458269.9,47106429.7,47753482.5,48399434.4,49044288.9,49688050.7,50330727.9,50972322.2,51612837.7,52252282.7,52890660.1,53527974.5,54164230.5,54799432.5,55433585,56066692.3,56698758.7,57329788.6,57959786,58588755.3,59216700.4,59843625.4,60469534.4,61094431.2,61718319.8,62341204.2,62963088,63583975.1,64203869.2,64822774.2,65440693.4,66057630.5,66673589.6,67288573.7],
        "upper_0.95_confidnece_interval": [0,784959.3,1546260.5,2302726.8,3055604.6,3805328.5,4552252.3,5296584.9,6038461.2,6778022.5,7515367.4,8250578.4,8983749.7,9714914.2,10444147.5,11171510.1,11897038.7,12620776.1,13342754.2,14063005.4,14781576.2,15498473.1,16213745.3,16927405.5,17639486.4,18349994.3,19058963.5,19766410.2,20472344.6,21176798.2,21879775.9,22581300.3,23281381.3,23980035.8,24677279.6,25373120.7,26067569.8,26760647.8,27452363.4,28142723.7,28831740.4,29519426.7,30205794.2,30890848.6,31574601.6,32257057.2,32938230.9,33618129.1,34296759.3,34974132.7,35650253.1,36325129.4,36998772.6,37671185.1,38342377.1,39012355.7,39681127.5,40348695.8,41015074.8,41680265.9,42344272.1,43007108.8,43668774.4,44329277.3,44988624.5,45646821.4,46303873.5,46959784.3,47614562.2,48268211.1,48920738.8,49572145.8,50222440.4,50871628.6,51519711.6,52166697.6,52812591.2,53457396.5,54101118.3,54743761.2,55385329.9,56025828.7,56665262.3,57303634.9,57940951.1,58577215,59212431,59846603.2,60479735.8,61111832.8,61742898.4,62372936.6,63001951.2,63629946.3,64256925.7,64882893.2,65507852.6,66131807.8,66754762.5,67376720,67997684.4]
    },
    "peak_length_distribution": {
        "peak_length": [0,2.93542074363992,5.87084148727984,8.80626223091977,11.7416829745597,14.6771037181996,17.6125244618395,20.5479452054795,23.4833659491194,26.4187866927593,29.3542074363992,32.2896281800391,35.2250489236791,38.160469667319,41.0958904109589,44.0313111545988,46.9667318982387,49.9021526418787,52.8375733855186,55.7729941291585,58.7084148727984,61.6438356164384,64.5792563600783,67.5146771037182,70.4500978473581,73.385518590998,76.320939334638,79.2563600782779,82.1917808219178,85.1272015655577,88.0626223091976,90.9980430528376,93.9334637964775,96.8688845401174,99.8043052837573,102.739726027397,105.675146771037,108.610567514677,111.545988258317,114.481409001957,117.416829745597,120.352250489237,123.287671232877,126.223091976517,129.158512720157,132.093933463796,135.029354207436,137.964774951076,140.900195694716,143.835616438356,146.771037181996,149.706457925636,152.641878669276,155.577299412916,158.512720156556,161.448140900196,164.383561643836,167.318982387476,170.254403131115,173.189823874755,176.125244618395,179.060665362035,181.996086105675,184.931506849315,187.866927592955,190.802348336595,193.737769080235,196.673189823875,199.608610567515,202.544031311155,205.479452054795,208.414872798434,211.350293542074,214.285714285714,217.221135029354,220.156555772994,223.091976516634,226.027397260274,228.962818003914,231.898238747554,234.833659491194,237.769080234834,240.704500978474,243.639921722114,246.575342465753,249.510763209393,252.446183953033,255.381604696673,258.317025440313,261.252446183953,264.187866927593,267.123287671233,270.058708414873,272.994129158513,275.929549902153,278.864970645793,281.800391389432,284.735812133072,287.671232876712,290.606653620352,293.542074363992,296.477495107632,299.412915851272,302.348336594912,305.283757338552,308.219178082192,311.154598825832,314.090019569472,317.025440313112,319.960861056751,322.896281800391,325.831702544031,328.767123287671,331.702544031311,334.637964774951,337.573385518591,340.508806262231,343.444227005871,346.379647749511,349.315068493151,352.250489236791,355.185909980431,358.12133072407,361.05675146771,363.99217221135,366.92759295499,369.86301369863,372.79843444227,375.73385518591,378.66927592955,381.60469667319,384.54011741683,387.47553816047,390.41095890411,393.34637964775,396.281800391389,399.217221135029,402.152641878669,405.088062622309,408.023483365949,410.958904109589,413.894324853229,416.829745596869,419.765166340509,422.700587084149,425.636007827789,428.571428571429,431.506849315069,434.442270058708,437.377690802348,440.313111545988,443.248532289628,446.183953033268,449.119373776908,452.054794520548,454.990215264188,457.925636007828,460.861056751468,463.796477495108,466.731898238748,469.667318982387,472.602739726027,475.538160469667,478.473581213307,481.409001956947,484.344422700587,487.279843444227,490.215264187867,493.150684931507,496.086105675147,499.021526418787,501.956947162427,504.892367906067,507.827788649706,510.763209393346,513.698630136986,516.634050880626,519.569471624266,522.504892367906,525.440313111546,528.375733855186,531.311154598826,534.246575342466,537.181996086106,540.117416829746,543.052837573386,545.988258317025,548.923679060665,551.859099804305,554.794520547945,557.729941291585,560.665362035225,563.600782778865,566.536203522505,569.471624266145,572.407045009785,575.342465753425,578.277886497065,581.213307240704,584.148727984344,587.084148727984,590.019569471624,592.954990215264,595.890410958904,598.825831702544,601.761252446184,604.696673189824,607.632093933464,610.567514677104,613.502935420744,616.438356164384,619.373776908024,622.309197651663,625.244618395303,628.180039138943,631.115459882583,634.050880626223,636.986301369863,639.921722113503,642.857142857143,645.792563600783,648.727984344423,651.663405088063,654.598825831703,657.534246575342,660.469667318982,663.405088062622,666.340508806262,669.275929549902,672.211350293542,675.146771037182,678.082191780822,681.017612524462,683.953033268102,686.888454011742,689.823874755382,692.759295499022,695.694716242661,698.630136986301,701.565557729941,704.500978473581,707.436399217221,710.371819960861,713.307240704501,716.242661448141,719.178082191781,722.113502935421,725.048923679061,727.984344422701,730.919765166341,733.85518590998,736.79060665362,739.72602739726,742.6614481409,745.59686888454,748.53228962818,751.46771037182,754.40313111546,757.3385518591,760.27397260274,763.20939334638,766.14481409002,769.080234833659,772.015655577299,774.951076320939,777.886497064579,780.821917808219,783.757338551859,786.692759295499,789.628180039139,792.563600782779,795.499021526419,798.434442270059,801.369863013699,804.305283757339,807.240704500978,810.176125244618,813.111545988258,816.046966731898,818.982387475538,821.917808219178,824.853228962818,827.788649706458,830.724070450098,833.659491193738,836.594911937378,839.530332681018,842.465753424658,845.401174168298,848.336594911937,851.272015655577,854.207436399217,857.142857142857,860.078277886497,863.013698630137,865.949119373777,868.884540117417,871.819960861057,874.755381604697,877.690802348337,880.626223091976,883.561643835616,886.497064579256,889.432485322896,892.367906066536,895.303326810176,898.238747553816,901.174168297456,904.109589041096,907.045009784736,909.980430528376,912.915851272016,915.851272015656,918.786692759296,921.722113502935,924.657534246575,927.592954990215,930.528375733855,933.463796477495,936.399217221135,939.334637964775,942.270058708415,945.205479452055,948.140900195695,951.076320939335,954.011741682975,956.947162426614,959.882583170254,962.818003913894,965.753424657534,968.688845401174,971.624266144814,974.559686888454,977.495107632094,980.430528375734,983.365949119374,986.301369863014,989.236790606654,992.172211350294,995.107632093933,998.043052837573,1000.97847358121,1003.91389432485,1006.84931506849,1009.78473581213,1012.72015655577,1015.65557729941,1018.59099804305,1021.52641878669,1024.46183953033,1027.39726027397,1030.33268101761,1033.26810176125,1036.20352250489,1039.13894324853,1042.07436399217,1045.00978473581,1047.94520547945,1050.88062622309,1053.81604696673,1056.75146771037,1059.68688845401,1062.62230919765,1065.55772994129,1068.49315068493,1071.42857142857,1074.36399217221,1077.29941291585,1080.23483365949,1083.17025440313,1086.10567514677,1089.04109589041,1091.97651663405,1094.91193737769,1097.84735812133,1100.78277886497,1103.71819960861,1106.65362035225,1109.58904109589,1112.52446183953,1115.45988258317,1118.39530332681,1121.33072407045,1124.26614481409,1127.20156555773,1130.13698630137,1133.07240704501,1136.00782778865,1138.94324853229,1141.87866927593,1144.81409001957,1147.74951076321,1150.68493150685,1153.62035225049,1156.55577299413,1159.49119373777,1162.42661448141,1165.36203522505,1168.29745596869,1171.23287671233,1174.16829745597,1177.10371819961,1180.03913894325,1182.97455968689,1185.90998043053,1188.84540117417,1191.78082191781,1194.71624266145,1197.65166340509,1200.58708414873,1203.52250489237,1206.45792563601,1209.39334637965,1212.32876712329,1215.26418786693,1218.19960861057,1221.13502935421,1224.07045009785,1227.00587084149,1229.94129158513,1232.87671232877,1235.81213307241,1238.74755381605,1241.68297455969,1244.61839530333,1247.55381604697,1250.48923679061,1253.42465753425,1256.36007827789,1259.29549902153,1262.23091976517,1265.16634050881,1268.10176125245,1271.03718199609,1273.97260273973,1276.90802348337,1279.84344422701,1282.77886497065,1285.71428571429,1288.64970645793,1291.58512720157,1294.52054794521,1297.45596868885,1300.39138943249,1303.32681017613,1306.26223091977,1309.19765166341,1312.13307240705,1315.06849315068,1318.00391389432,1320.93933463796,1323.8747553816,1326.81017612524,1329.74559686888,1332.68101761252,1335.61643835616,1338.5518590998,1341.48727984344,1344.42270058708,1347.35812133072,1350.29354207436,1353.228962818,1356.16438356164,1359.09980430528,1362.03522504892,1364.97064579256,1367.9060665362,1370.84148727984,1373.77690802348,1376.71232876712,1379.64774951076,1382.5831702544,1385.51859099804,1388.45401174168,1391.38943248532,1394.32485322896,1397.2602739726,1400.19569471624,1403.13111545988,1406.06653620352,1409.00195694716,1411.9373776908,1414.87279843444,1417.80821917808,1420.74363992172,1423.67906066536,1426.614481409,1429.54990215264,1432.48532289628,1435.42074363992,1438.35616438356,1441.2915851272,1444.22700587084,1447.16242661448,1450.09784735812,1453.03326810176,1455.9686888454,1458.90410958904,1461.83953033268,1464.77495107632,1467.71037181996,1470.6457925636,1473.58121330724,1476.51663405088,1479.45205479452,1482.38747553816,1485.3228962818,1488.25831702544,1491.19373776908,1494.12915851272,1497.06457925636,1500],
        "density": [0,0,0,0,6.28423264576242e-17,4.93201346973548e-16,2.17467976549123e-15,8.41327495785008e-15,3.60739583076803e-14,1.48517861533292e-13,5.86078526601663e-13,2.21934206915524e-12,8.06425027860198e-12,2.8110163167404e-11,9.39629733015692e-11,3.01067656646305e-10,9.24238153302164e-10,2.71700320989298e-09,7.64418936189027e-09,2.05698194181709e-08,5.79243706147041e-08,1.59981733353717e-07,4.25380139617506e-07,1.08912237324315e-06,2.68589957776826e-06,6.38217038353929e-06,1.46184286042501e-05,3.22935962822768e-05,6.8848093790087e-05,0.000141760131798502,0.000282151406122221,0.000543383348718445,0.00102797122844434,0.00192224314784521,0.00347183712511685,0.00606018244275354,0.0102297367956536,0.0167107452439801,0.0264362126130167,0.0405329268662056,0.0602784600320024,0.0870163782774706,0.122026721276811,0.166356126285303,0.220621339149522,0.285600819845184,0.359333486821384,0.439797260411722,0.524258240389409,0.609443297569584,0.691854137041109,0.76812918424966,0.835399023195137,0.891580753888238,0.935565899909856,0.967273896651869,0.987566006620978,0.997675932548414,1,0.997110087434136,0.990880012001015,0.9827926499433,0.973877610352846,0.96472405808286,0.955548740269923,0.946296122059047,0.936748554923782,0.926628440539112,0.915680131562222,0.903718202532968,0.890589763288456,0.876457535131559,0.861481119223992,0.84587995541722,0.829905155964479,0.81381308404196,0.797843009015737,0.78220031093751,0.76704593092685,0.752492065452927,0.738603486114748,0.725403349649467,0.71292069615134,0.701098691535326,0.689866415423336,0.679173681869484,0.668971082133837,0.659211884742165,0.649852708436014,0.640853686795703,0.6321787036826,0.623796025154402,0.615679351436672,0.60780902897658,0.600177262415943,0.592793349653278,0.585642260159898,0.578728697784673,0.572054873687521,0.565616373792531,0.559398873151043,0.553376408207336,0.547511681483474,0.541758537753832,0.536066369094562,0.530385838854408,0.524675026532377,0.518899925727839,0.51305391460566,0.507150143849888,0.501215457657085,0.49528737841599,0.489408630900224,0.483621328336958,0.477961470080776,0.472454282659822,0.467110805085495,0.461925990715544,0.45687847639152,0.451933433763186,0.447036686232657,0.4421258792328,0.437145712115505,0.432046494747182,0.426788434576171,0.421344870309129,0.415704338720905,0.409871506500801,0.403867082397578,0.397726840958449,0.391499848334109,0.385245908661065,0.379042604560966,0.372964150108568,0.367074888345547,0.361429637213782,0.356068548111288,0.351013865751963,0.346268603358617,0.341817438940877,0.337629828198329,0.333664997674933,0.329878176127567,0.326227188986834,0.322681865544712,0.319222060828183,0.315841041891659,0.312549458092606,0.309365442315572,0.306309107337963,0.303397082665438,0.300638068232114,0.29803013067842,0.295560100288988,0.293205011196657,0.290935140481764,0.288717930509263,0.286520998511863,0.284314588094914,0.282081330900201,0.279812102238573,0.277506493972849,0.275173045239747,0.272829142123354,0.270500289396205,0.268218370107416,0.266018580464097,0.263934959497271,0.261994791590229,0.260220658243331,0.258601678961453,0.257098531303182,0.255658298774243,0.254212929849976,0.252686786394466,0.251005666107117,0.249106022725105,0.246943103556964,0.244496892531212,0.241775053353521,0.238812467892023,0.235666206673063,0.232414035459916,0.229153348194549,0.225960495835067,0.222898459516418,0.220011826753071,0.217324693684945,0.214841525692521,0.21255057555669,0.210429090256765,0.208449283345698,0.206583947774172,0.204810659296798,0.203118129522546,0.201493287775354,0.199926867928529,0.198408581488531,0.196921175358678,0.195438488921899,0.193925857924201,0.19234296350039,0.190648729819894,0.188807458399631,0.18679511320928,0.184604582013795,0.182245844194626,0.1797535495039,0.177194435395726,0.174631781177017,0.17212959132725,0.169745349187122,0.167524119565831,0.165494718393555,0.163668290251307,0.162039235927109,0.16058806988639,0.159285514257787,0.158096996185151,0.156989771168337,0.155922080585685,0.154863926438126,0.153791068767151,0.152683771716118,0.151527013739863,0.150310940771865,0.149031444529622,0.147690579156168,0.146296473366291,0.144862467266065,0.143405391386216,0.141943632090258,0.140495511574786,0.139072216769593,0.137679751142249,0.136319848484788,0.134991349332749,0.13369178251019,0.132418642379876,0.131170005583517,0.129944365851682,0.128739821200322,0.127552963704899,0.126377942047107,0.125205277070985,0.124022844869561,0.122820029190195,0.121588527449733,0.120323862077649,0.119026098204673,0.117699599871373,0.116351906887666,0.11499201377489,0.113628458888339,0.112267666238899,0.110912920083563,0.109564346035206,0.108218847520821,0.106872831687369,0.105524445976841,0.104174589643301,0.102827555410513,0.101490917833811,0.100174714643163,0.0988900929449899,0.0976476805789246,0.0964559845913279,0.0953201096252728,0.0942413440109793,0.0932201314027188,0.0922439330211459,0.0913038617088941,0.0903911355595598,0.0894984515692829,0.0886209557684403,0.0877566601257253,0.0869062455475769,0.0860722890343821,0.0852580519649824,0.0844660542053733,0.0836967223674292,0.0829481726659862,0.0822125826924163,0.0814801959485354,0.080741532155447,0.0799885434521347,0.0792162165881847,0.0784235332938827,0.0776135564932459,0.0767926066911999,0.0759686942802583,0.075149539386216,0.074340606954889,0.0735437305841185,0.0727555803417343,0.0719670009085682,0.0711673025671649,0.0703450613566346,0.06948985325438,0.0685937860938909,0.0676526972172357,0.0666669463733937,0.0656417706311528,0.064587185191773,0.0635174206858301,0.062449897600339,0.0614068728457301,0.0604082531413016,0.0594689960665715,0.0586001453957926,0.0578073590121531,0.0570907232330464,0.0564453011166781,0.0558622856515434,0.0553305274468236,0.0548381498035273,0.0543739604765197,0.0539284201353202,0.0534941684036062,0.0530650615046292,0.0526358623639371,0.0522018940760793,0.0517577196204749,0.0512969718347086,0.050812653882263,0.0502978482842068,0.0497466865344541,0.0491553781599687,0.0485230834726577,0.0478524386322933,0.0471496002771051,0.0464229695403429,0.0456867573973508,0.0449527596618618,0.0442311302158403,0.0435295389562854,0.0428524680682186,0.042201000875685,0.0415731090411424,0.0409643665646784,0.0403689540773557,0.0397807746579217,0.039194491073571,0.0386061710203539,0.0380140942156766,0.0374192460419203,0.0368241078660266,0.0362323142994181,0.0356481968130737,0.0350763537073565,0.0345212438758288,0.0339867845835855,0.0334759371464822,0.0329902854485923,0.032529643576023,0.0320917603829066,0.0316731807334807,0.0312647988995014,0.0308585883887939,0.0304464017050329,0.0300210412525636,0.0295773212894157,0.0291129637201373,0.0286291929478951,0.0281309257505186,0.0276264957336021,0.0271269045316245,0.0266446493907777,0.0261944625799175,0.0257877798378378,0.0254293374611239,0.025120409123706,0.0248572353516984,0.0246314297200005,0.0244310339098381,0.0242420901010338,0.024050520425024,0.0238440522641034,0.0236139128865212,0.0233560411722542,0.0230714098734604,0.0227661134469721,0.0224534599015093,0.0221460313735272,0.0218560341399131,0.0215935931068823,0.0213654414565661,0.0211741538459658,0.0210179891556986,0.0208913223400985,0.0207855634865822,0.0206903948403661,0.0205951121406869,0.0204885985357651,0.0203624179460754,0.0202116080366542,0.0200327893249367,0.0198240324240018,0.0195843875976997,0.0193135498090577,0.0190117426131605,0.0186798246806737,0.0183195505880677,0.0179338683585872,0.0175271211157644,0.0171048699286373,0.0166745988318405,0.0162449166570726,0.0158230918613568,0.0154156676002162,0.015028157297274,0.0146649331162328,0.0143292756808401,0.0140235250507705,0.0137492629975974,0.013507463252476,0.0132985656944821,0.0131224568313777,0.0129806694761433,0.0128693132338654,0.0127848381510753,0.0127231866172903,0.0126792166247255,0.0126468161937101,0.0126191098317248,0.0125887466033409,0.0125482548221746,0.0124904449278355,0.0124088386349697,0.012298098050025,0.0121532010138313,0.0119714271201905,0.0117556439605164,0.0115087414291359,0.0112353726846775,0.0109415281457104,0.0106339856807401,0.0103196979921153,0.0100051921967653,0.009696063038972,0.00939663800378235,0.00910987810571988,0.00883755100139681,0.00858216602331179,0.00834368009491605,0.00812403759266624,0.00792665759096871,0.00775639218879726,0.00761915593610986,0.00752114620642447,0.00746776852399548,0.00746245024464759,0.00750556399698067,0.00759368090951155,0.00771933004589593,0.00787183400384372,0.00803495563763834,0.00819242253146212,0.00833020076391331,0.00843651240066421,0.00850269243367613,0.00852357714936311,0.00849745511259793,0.0084256782805935,0.00831206769272487,0.00816225314487243,0.00798306155856756,0.00778195557845279,0.00756654459138677,0.00734662648640509,0.00712962120159928,0.00692220000100259,0.00672990336846097,0.00655678523569807,0.0064051547770112,0.00627547896501293,0.00616648467112512,0.00607546471730698,0.00599875514687595,0.0059323185074776,0.00587253258301888,0.0058160187828266,0.00576106738985121,0.00570742484260776,0.00565587315206759,0.00560788929740537,0.00556522099972802,0.00552946005765846,0.00550169814632226,0.00548234392512099,0.00547116459986281,0.00546759065404599,0.00547143395810308,0.00548439983585411,0.00550979861995793,0.00555504284476684,0.00563174133578887,0.00575586305384515,0.0059471649699219,0.00622768652471126,0.00661920228531333,0.00713967548350331,0.00779896048091538,0.00859424092911522,0.00950592829522753,0.0104952144801715,0.0114885957363829,0.0124059190568585,0.0131634638561349,0.013682207468438,0.0138981951686609,0.0137714598933071]
    }
  },
  "ENCODE PE refernce": {
    "data information": {
        "pipe version": "V3",
        "Docker tag": "target",
        "genome": "mm10",
        "read type": "Paired-end data"
    },
    "mapping stats": {
        "alignment program": "bwa",
        "alignment program version": "0.7.16a",
        "alignment program parameters": "bwa men",
        "post alignment program": "methylQA",
        "post alignment program version": "0.1.9",
        "post alignment program parameters": "methylQA atac",
        "total reads": [53521173,52841837,49568333,52179809,49691764,51407232,35924683,48416233,43503968,53935170,43919645,42278369,47548519,41466599,86375299,48785458,52082703,53078621,44189469,42364518,44562754,53140917,40755321,83791512,57818671,55554407,58056975,56463898,49454428,44646781,42044382,49443834,46776162,38328988,38505907,68272995,66315169,48348502,70091736,54588699,64152873,51902255,74018175,53219421,55307973,51449827,60200454,43550852,52300091,37376936,47681374,42220415,63001963,55360933],
        "mapped reads": [43153580,42352477,40229473,42084338,40291437,42716896,28866333,39886059,34766414,43002187,35234920,34848824,39069214,34125943,69416398,38266364,41765449,42472011,35204142,33813586,39790102,48179030,36332407,71257866,49597633,47494669,49211981,47609742,40952588,36620751,33314063,39567448,35867421,30385187,29796011,56853075,55132909,39816744,55306693,42147170,49206590,40035934,63486809,44917615,47228932,44222865,44153141,32173136,39219035,26981011,34913406,30567779,53595288,45140181],
        "uniquely mapped reads": [42735187,41950396,39892521,41671318,40023928,42419895,28655248,39664818,34533848,42699479,35029567,34684686,38882460,33902845,68757933,37885873,41382639,42061841,34913489,33524222,39513192,47902342,36053467,70701654,49250461,47163021,48894920,47293755,40607252,36297159,33036123,39224311,35600242,30109011,29557977,56293216,54708676,39509001,54921964,41772135,48755362,39678322,62946399,44506281,46848675,43877034,43882564,31955516,38963822,26790046,34708259,30315741,53112493,44697439],
        "non-redundant mapped reads": [39045290,38027740,36822477,37914795,35681662,38482560,25640256,35563680,30468442,35964313,29983078,29486250,34677104,28328824,59970088,33388823,37659611,37990545,31206803,30136814,35594598,42508046,32708309,56716944,43786201,41405826,42048361,39994718,33434773,29290122,29440814,33946966,31312483,27073004,25517372,45645909,41507394,29033906,38777600,27948067,41966430,34194715,55550516,39160672,40919632,38422470,38791422,29171658,35229878,23537123,29178926,25560630,48237836,38811180],
        "useful reads": [38286495,37046058,36092973,37322817,34664807,37588382,25198225,34770694,29541806,34877663,28883250,28465741,33727855,27478975,58755388,32416527,36901151,37180635,30266809,29333834,34757288,41636024,32125668,55044789,42760084,40230858,40522043,38435668,32166278,27815309,28378414,32719725,30043071,26312383,24306859,44010703,39473963,27272092,36609370,25903627,40664825,32947367,54382844,38030358,39852634,37534831,37743991,28338484,34346943,22692393,28743123,24922703,47262684,37207722],
        "useful single ends": [76572990,74092116,72185946,74645634,69329614,75176764,50396450,69541388,59083612,69755326,57766500,56931482,67455710,54957950,117510776,64833054,73802302,74361270,60533618,58667668,69514576,83272048,64251336,110089578,85520168,80461716,81044086,76871336,64332556,55630618,56756828,65439450,60086142,52624766,48613718,88021406,78947926,54544184,73218740,51807254,81329650,65894734,108765688,76060716,79705268,75069662,75487982,56676968,68693886,45384786,57486246,49845406,94525368,74415444]
    },
    "library complexity": {
        "after alignment PCR duplicates percentage": [0.0669999999999999,0.0590000000000001,0.0580000000000001,0.077,0.071,0.0649999999999999,0.096,0.081,0.081,0.117,0.092,0.105,0.074,0.134,0.098,0.083,0.071,0.075,0.071,0.074,0.071,0.088,0.079,0.124,0.083,0.082,0.075,0.081,0.123,0.111,0.0590000000000001,0.078,0.054,0.0669999999999999,0.0639999999999999,0.11,0.115,0.136,0.155,0.179,0.09,0.083,0.087,0.079,0.092,0.098,0.081,0.0580000000000001,0.069,0.086,0.153,0.141,0.0639999999999999,0.056]
    },
    "peak analysis": {
        "peak calling software": "macs2",
        "peak calling parameters": "--keep-dup 1000 --nomodel --shift 0 --extsize 150",
        "peak threshold parameter": "qvaule",
        "peak threshold": 0.01,
        "reads percentage under peaks": [0.1292,0.1194,0.1715,0.0954,0.1865,0.2143,0.1892,0.2739,0.1869,0.1951,0.2468,0.3124,0.376,0.2318,0.1301,0.1031,0.1242,0.1263,0.1443,0.1407,0.1777,0.2005,0.1508,0.1709,0.2131,0.2143,0.251,0.2289,0.1848,0.151,0.1377,0.1413,0.1771,0.1138,0.1571,0.1233,0.2416,0.1962,0.4163,0.3119,0.2875,0.319,0.1761,0.1324,0.183,0.1939,0.1985,0.1781,0.1754,0.1624,0.1951,0.1016,0.1347,0.1694],
        "reads number under peaks": [9811438,8774097,12265101,7065600,12796830,15947809,9432387,18834750,10926114,13473224,14096158,17550145,24926840,12577431,15169277,6629860,9084049,9307498,8645913,8176337,12230668,16525586,9593749,18636859,18014767,17054844,20096977,17386923,11681493,8269024,7742949,9158421,10534062,5929255,7531003,10730541,18703706,10522241,29572680,15697637,23050218,20696530,18984054,9978365,14435791,14406726,14822352,9985987,11925204,7290002,11093907,5020171,12607822,12463879],
        "peaks number in promoter regions": [14477,14145,14868,13733,14744,15237,14200,15584,14510,15211,15167,15650,16473,15521,14686,13440,14154,14226,14242,14038,15208,15512,14874,16104,16799,16911,17311,16685,14850,13967,15366,15635,16277,15258,13886,13856,13595,13099,15925,14592,17238,17159,15520,14358,15490,15269,14747,14510,14806,13866,14716,13077,15707,16417],
        "peaks number in non-promoter regions": [33335,30617,43721,24189,50064,53274,37693,63859,43847,52738,59340,68210,86462,57548,37472,24065,31615,32290,31700,29608,47013,55366,42303,57261,57169,60123,67570,59511,43994,36843,40786,43070,53779,34782,31055,28790,33074,27953,60339,45326,78165,74463,47085,31465,48264,46018,44445,35400,40301,28548,39066,18454,46668,54210]
    },
    "enrichment": {
        "enrichment ratio in coding promoter regions": [14.136,12.296,16.16,8.18,8.513,14.933,8.581,9.32,11.5,12.383,10.257,11.688,11.221,12.094,6.971,12.52,8.317,10.669,8.456,11.689,11.863,11.185,17.456,21.05,11.468,11.929,6.977,10.024,9.969,12.054,6.788,20.625,8.156,11.148,8.239,9.982,9.362,14.347,9.821,10.313,13.651,13.208,10.01,25.296,11.727,8.301,13.642,8.733,7.846,11.113,7.224,8.14,13.448,16.25],
        "subsampled 10M enrichment ratio": [20.0751960291,16.9365522834,28.5592416042,16.5750076566,15.6160587689,17.8926912918,17.2628079078,17.9767092513,17.5390101683,17.6032387948,19.2296282833,17.7392147705,16.9579954453,16.8918353327,14.9166314269,18.8505432093,18.0756918468,16.4321073588,15.5357255478,17.426875664,17.7421222561,16.8158703756,20.0085220044,22.2452856369,16.2795459894,18.5311481308,15.9968380655,18.0918133729,16.522756908,17.2040802699,14.5428255822,27.2038806667,14.4630142898,16.2649026692,14.8475900548,16.4251850656,16.1057058162,18.1814386273,16.9892634495,15.9255873558,24.954998221,19.210203775,16.1552163426,29.8046802599,17.1783351364,14.5727165738,18.7300320681,15.4182600148,14.7647221963,17.2786818249,14.2266656533,14.67821709,19.4827391372,21.3672015923],
        "percentage of background RPKM larger than 0.3777": [0.1912,0.2199,0.1426,0.2792,0.0829,0.0754,0.1392,0.0408,0.0754,0.0573,0.0376,0.02,0.0152,0.0591,0.2146,0.2441,0.1914,0.2066,0.1376,0.1606,0.0615,0.0422,0.1621,0.0699,0.0533,0.0491,0.0281,0.0433,0.1091,0.1455,0.1327,0.1118,0.0856,0.1363,0.16,0.2046,0.0866,0.106,0.0265,0.1336,0.069,0.0542,0.1241,0.1873,0.1068,0.0887,0.0587,0.0855,0.0722,0.1198,0.0634,0.2114,0.1007,0.1295]
    }
  }
} 
