{
  "Sample_QC_info": {
    "data_information": {
        "file_name": "4.oLT_1",
        "genome": "hg38",
        "read_type": "Paired-end data",
        "pipe_version": "v1.00",
        "Docker_image_id": "sha256:8896f8f11c355df12838687e195d59aa152c56ecbbc891cbd404da81abc758a3",
        "bash_script_MD5": "f281c99b69baed5d8e94154dbcf0ad16",
        "running_time": "Fri_Oct__4_01:59:02_CDT_2019"
    },
    "pre_alignment_stats": {
        "program1": "cutadapt",
        "program1_version": "1.16",
        "written_reads_by_cutadapt": 58969735,
        "program2": "FastQC",
        "program2_version": "0.11.7"
    },
    "mapping_stats": {
        "alignment_program": "bwa",
        "alignment_program_version": "0.7.16a",
        "alignment_program_parameters": "bwa mem",
        "post_alignment_program": "methylQA",
        "post_alignment_program_version": "0.2.1",
        "post_alignment_program_parameters": "methylQA atac",
        "total_reads": 61643516,
        "mapped_reads": 40086036,
        "uniquely_mapped_reads": 34979859,
        "non-redundant_mapped_reads": 33418498,
        "useful_single_ends": 66836996
    },
    "library_complexity": {
        "before_alignment_library_duplicates_percentage": 0.3045,
        "after_alignment_PCR_duplicates_percentage": 0.045
    },
    "insertion_size_distribution": {
        "insertion_size": [0,0.978473581213307,1.95694716242661,2.93542074363992,3.91389432485323,4.89236790606654,5.87084148727984,6.84931506849315,7.82778864970646,8.80626223091977,9.78473581213307,10.7632093933464,11.7416829745597,12.720156555773,13.6986301369863,14.6771037181996,15.6555772994129,16.6340508806262,17.6125244618395,18.5909980430528,19.5694716242661,20.5479452054795,21.5264187866928,22.5048923679061,23.4833659491194,24.4618395303327,25.440313111546,26.4187866927593,27.3972602739726,28.3757338551859,29.3542074363992,30.3326810176125,31.3111545988258,32.2896281800391,33.2681017612524,34.2465753424658,35.2250489236791,36.2035225048924,37.1819960861057,38.160469667319,39.1389432485323,40.1174168297456,41.0958904109589,42.0743639921722,43.0528375733855,44.0313111545988,45.0097847358121,45.9882583170254,46.9667318982387,47.945205479452,48.9236790606654,49.9021526418787,50.880626223092,51.8590998043053,52.8375733855186,53.8160469667319,54.7945205479452,55.7729941291585,56.7514677103718,57.7299412915851,58.7084148727984,59.6868884540117,60.665362035225,61.6438356164384,62.6223091976517,63.600782778865,64.5792563600783,65.5577299412916,66.5362035225049,67.5146771037182,68.4931506849315,69.4716242661448,70.4500978473581,71.4285714285714,72.4070450097847,73.385518590998,74.3639921722113,75.3424657534246,76.320939334638,77.2994129158513,78.2778864970646,79.2563600782779,80.2348336594912,81.2133072407045,82.1917808219178,83.1702544031311,84.1487279843444,85.1272015655577,86.105675146771,87.0841487279843,88.0626223091976,89.041095890411,90.0195694716243,90.9980430528376,91.9765166340509,92.9549902152642,93.9334637964775,94.9119373776908,95.8904109589041,96.8688845401174,97.8473581213307,98.825831702544,99.8043052837573,100.782778864971,101.761252446184,102.739726027397,103.718199608611,104.696673189824,105.675146771037,106.65362035225,107.632093933464,108.610567514677,109.58904109589,110.567514677104,111.545988258317,112.52446183953,113.502935420744,114.481409001957,115.45988258317,116.438356164384,117.416829745597,118.39530332681,119.373776908023,120.352250489237,121.33072407045,122.309197651663,123.287671232877,124.26614481409,125.244618395303,126.223091976517,127.20156555773,128.180039138943,129.158512720157,130.13698630137,131.115459882583,132.093933463796,133.07240704501,134.050880626223,135.029354207436,136.00782778865,136.986301369863,137.964774951076,138.94324853229,139.921722113503,140.900195694716,141.87866927593,142.857142857143,143.835616438356,144.814090019569,145.792563600783,146.771037181996,147.749510763209,148.727984344423,149.706457925636,150.684931506849,151.663405088063,152.641878669276,153.620352250489,154.598825831703,155.577299412916,156.555772994129,157.534246575342,158.512720156556,159.491193737769,160.469667318982,161.448140900196,162.426614481409,163.405088062622,164.383561643836,165.362035225049,166.340508806262,167.318982387476,168.297455968689,169.275929549902,170.254403131115,171.232876712329,172.211350293542,173.189823874755,174.168297455969,175.146771037182,176.125244618395,177.103718199609,178.082191780822,179.060665362035,180.039138943249,181.017612524462,181.996086105675,182.974559686888,183.953033268102,184.931506849315,185.909980430528,186.888454011742,187.866927592955,188.845401174168,189.823874755382,190.802348336595,191.780821917808,192.759295499022,193.737769080235,194.716242661448,195.694716242661,196.673189823875,197.651663405088,198.630136986301,199.608610567515,200.587084148728,201.565557729941,202.544031311155,203.522504892368,204.500978473581,205.479452054795,206.457925636008,207.436399217221,208.414872798434,209.393346379648,210.371819960861,211.350293542074,212.328767123288,213.307240704501,214.285714285714,215.264187866928,216.242661448141,217.221135029354,218.199608610568,219.178082191781,220.156555772994,221.135029354207,222.113502935421,223.091976516634,224.070450097847,225.048923679061,226.027397260274,227.005870841487,227.984344422701,228.962818003914,229.941291585127,230.91976516634,231.898238747554,232.876712328767,233.85518590998,234.833659491194,235.812133072407,236.79060665362,237.769080234834,238.747553816047,239.72602739726,240.704500978474,241.682974559687,242.6614481409,243.639921722113,244.618395303327,245.59686888454,246.575342465753,247.553816046967,248.53228962818,249.510763209393,250.489236790607,251.46771037182,252.446183953033,253.424657534247,254.40313111546,255.381604696673,256.360078277886,257.3385518591,258.317025440313,259.295499021526,260.27397260274,261.252446183953,262.230919765166,263.20939334638,264.187866927593,265.166340508806,266.14481409002,267.123287671233,268.101761252446,269.080234833659,270.058708414873,271.037181996086,272.015655577299,272.994129158513,273.972602739726,274.951076320939,275.929549902153,276.908023483366,277.886497064579,278.864970645793,279.843444227006,280.821917808219,281.800391389432,282.778864970646,283.757338551859,284.735812133072,285.714285714286,286.692759295499,287.671232876712,288.649706457926,289.628180039139,290.606653620352,291.585127201566,292.563600782779,293.542074363992,294.520547945205,295.499021526419,296.477495107632,297.455968688845,298.434442270059,299.412915851272,300.391389432485,301.369863013699,302.348336594912,303.326810176125,304.305283757339,305.283757338552,306.262230919765,307.240704500978,308.219178082192,309.197651663405,310.176125244618,311.154598825832,312.133072407045,313.111545988258,314.090019569472,315.068493150685,316.046966731898,317.025440313112,318.003913894325,318.982387475538,319.960861056751,320.939334637965,321.917808219178,322.896281800391,323.874755381605,324.853228962818,325.831702544031,326.810176125245,327.788649706458,328.767123287671,329.745596868885,330.724070450098,331.702544031311,332.681017612524,333.659491193738,334.637964774951,335.616438356164,336.594911937378,337.573385518591,338.551859099804,339.530332681018,340.508806262231,341.487279843444,342.465753424658,343.444227005871,344.422700587084,345.401174168297,346.379647749511,347.358121330724,348.336594911937,349.315068493151,350.293542074364,351.272015655577,352.250489236791,353.228962818004,354.207436399217,355.18590998043,356.164383561644,357.142857142857,358.12133072407,359.099804305284,360.078277886497,361.05675146771,362.035225048924,363.013698630137,363.99217221135,364.970645792564,365.949119373777,366.92759295499,367.906066536204,368.884540117417,369.86301369863,370.841487279843,371.819960861057,372.79843444227,373.776908023483,374.755381604697,375.73385518591,376.712328767123,377.690802348337,378.66927592955,379.647749510763,380.626223091976,381.60469667319,382.583170254403,383.561643835616,384.54011741683,385.518590998043,386.497064579256,387.47553816047,388.454011741683,389.432485322896,390.41095890411,391.389432485323,392.367906066536,393.346379647749,394.324853228963,395.303326810176,396.281800391389,397.260273972603,398.238747553816,399.217221135029,400.195694716243,401.174168297456,402.152641878669,403.131115459883,404.109589041096,405.088062622309,406.066536203523,407.045009784736,408.023483365949,409.001956947162,409.980430528376,410.958904109589,411.937377690802,412.915851272016,413.894324853229,414.872798434442,415.851272015656,416.829745596869,417.808219178082,418.786692759295,419.765166340509,420.743639921722,421.722113502935,422.700587084149,423.679060665362,424.657534246575,425.636007827789,426.614481409002,427.592954990215,428.571428571429,429.549902152642,430.528375733855,431.506849315068,432.485322896282,433.463796477495,434.442270058708,435.420743639922,436.399217221135,437.377690802348,438.356164383562,439.334637964775,440.313111545988,441.291585127202,442.270058708415,443.248532289628,444.227005870841,445.205479452055,446.183953033268,447.162426614481,448.140900195695,449.119373776908,450.097847358121,451.076320939335,452.054794520548,453.033268101761,454.011741682975,454.990215264188,455.968688845401,456.947162426614,457.925636007828,458.904109589041,459.882583170254,460.861056751468,461.839530332681,462.818003913894,463.796477495108,464.774951076321,465.753424657534,466.731898238748,467.710371819961,468.688845401174,469.667318982387,470.645792563601,471.624266144814,472.602739726027,473.581213307241,474.559686888454,475.538160469667,476.516634050881,477.495107632094,478.473581213307,479.452054794521,480.430528375734,481.409001956947,482.38747553816,483.365949119374,484.344422700587,485.3228962818,486.301369863014,487.279843444227,488.25831702544,489.236790606654,490.215264187867,491.19373776908,492.172211350294,493.150684931507,494.12915851272,495.107632093933,496.086105675147,497.06457925636,498.043052837573,499.021526418787,500],
        "density": [3.08382758055918e-05,5.37362748387126e-05,9.16698657693128e-05,0.000154515170547673,0.000261579994221934,0.000433617311743988,0.000704087835734175,0.00112029360937366,0.00174745387403478,0.0026733108911892,0.00401309892423368,0.00591462399129839,0.00856311081021398,0.012276793253397,0.0173910953354733,0.0241816618441971,0.0330185095234171,0.044293727532985,0.0584043854163736,0.0757308269951367,0.0966110100194419,0.121311957705457,0.149999801655035,0.183110213964321,0.22011040111382,0.260512864810892,0.303751991800377,0.349105466687593,0.395725629514411,0.442682521439484,0.489016366816183,0.533796427308284,0.576145039520693,0.614973877787913,0.650200406627967,0.681707440408534,0.709622591422129,0.734295433690405,0.756257063930865,0.776165167698099,0.794738604192537,0.812686263323308,0.830660351963638,0.849194269689182,0.868440718093304,0.888313640351842,0.908494212874677,0.928457693455053,0.947516111831168,0.964873036232851,0.979686049241152,0.991132141926195,0.998068678293412,1,0.996805583248468,0.988385426906438,0.974842869328448,0.956465518372481,0.933696280423563,0.907097574436832,0.87731193500339,0.845022178840608,0.810793941871703,0.775556040489952,0.739887298873107,0.704274927064723,0.669127277410499,0.634774874661504,0.60147481471527,0.569417458640561,0.538734460455622,0.509547234587693,0.48200892354058,0.455962832735819,0.431380525187097,0.408217508781675,0.38641796929272,0.365918776894545,0.346652785251117,0.32855145089814,0.31154681198798,0.295632818136079,0.280737238912087,0.266733628954178,0.253567542889098,0.241188022720706,0.229547534982525,0.218601884745071,0.208310103223055,0.198634300377078,0.18953947227837,0.181043822484364,0.173075308536027,0.165590093785538,0.158562651709675,0.151968923111664,0.145786268591908,0.139993492699847,0.134570916143844,0.129500465200529,0.124767478019221,0.120393136397457,0.116323394280878,0.112547018084004,0.109053600620477,0.105833206628093,0.102876046873813,0.10017221539245,0.0977115175325733,0.0954834083333749,0.0934857187374773,0.0917151340537083,0.0901417389914353,0.0887558681332327,0.0875489445175424,0.0865137041234021,0.0856443142319691,0.0849363679245224,0.0843867465151033,0.0839933519704218,0.0837665938731557,0.0837007353765523,0.0837855893641016,0.0840179479234531,0.0843933860872028,0.0849062898084324,0.0855500876963281,0.0863176707139289,0.0872019640653814,0.0881965960019005,0.0893082498591428,0.0905240914736432,0.0918431128511938,0.0932681701810004,0.0948038095217613,0.0964555300181097,0.0982289091366194,0.100128690455366,0.102157942496446,0.104319979818614,0.106623248395713,0.109047897134582,0.111586825276332,0.114232562464777,0.116978483127438,0.119820001806014,0.122755615917188,0.125787670895323,0.128922736632417,0.132178902375363,0.135575955510497,0.139121634395283,0.142830836599115,0.146715146005881,0.15078090569028,0.155027647994476,0.159447054286684,0.164022582032115,0.168729853553891,0.173542998729758,0.178413948665139,0.183302701991137,0.188175946485929,0.193005916045204,0.197772257686164,0.202463176640276,0.207075785680863,0.2116156485157,0.216095571452563,0.220531907938892,0.224953800133699,0.229381478870033,0.233831866395967,0.238317017594682,0.242843007891637,0.24740932168994,0.252008728369136,0.256627608042191,0.261245650618996,0.265831960826095,0.270358541102758,0.274796471393507,0.279117294853014,0.283294189180085,0.287302957876502,0.291122808688222,0.294736895547673,0.298132609287358,0.301285172579816,0.304193329057719,0.306870847320034,0.309320390993814,0.311545836626041,0.313551340110669,0.315340455398309,0.316915366639892,0.318276289491091,0.319421089318366,0.32032046098827,0.320984524160741,0.321408958749726,0.321583861361976,0.321499415078845,0.321146569288686,0.320517604936676,0.319606546106461,0.318409395360958,0.316920205063055,0.315109968876725,0.313014307127245,0.310636628325454,0.307981174875387,0.305052825878206,0.301856986848397,0.298399567731999,0.294687042548958,0.290726576930056,0.286514793153007,0.282056271237404,0.277381159599733,0.272501999183089,0.26743276868424,0.262188798594575,0.256786609203033,0.251243683387119,0.245578189629161,0.239808674564999,0.23394835458663,0.228022607321335,0.22205256323352,0.216054955247123,0.210045690874746,0.204039832285144,0.19805160792298,0.192094441991077,0.18618098875504,0.180323160128736,0.174541895054075,0.168841138798759,0.163229608592794,0.157715670012309,0.152306785265392,0.147009477652164,0.141829311456085,0.136770891196016,0.131837882871991,0.127036794485002,0.122379156040521,0.117852933242414,0.113458484279199,0.109195737009884,0.105064288720663,0.101063491110981,0.0971925168883875,0.0934504060901159,0.0898360920589271,0.086356505607697,0.0830100502187288,0.0797870666202146,0.0766859486588218,0.0737049487946655,0.0708421851882878,0.0680956547417215,0.0654632495691362,0.0629427741423251,0.0605319604476614,0.0582389962957758,0.0560533187132841,0.0539693962484287,0.0519847224913765,0.0500967580469726,0.0483029477215964,0.04660074262187,0.0449876251754156,0.0434611343722253,0.0420194931753998,0.0406694352972543,0.0393985386357363,0.0382047504612567,0.0370860874486397,0.0360406194866353,0.0350664566458906,0.0341617410799301,0.0333246444599773,0.032553370376703,0.0318488576478565,0.0312116970400034,0.0306347298219656,0.0301163234627181,0.0296548476163688,0.0292486506550171,0.028896038133863,0.028595257164536,0.0283444900194376,0.0281418593270646,0.0279889344817777,0.0278820341979098,0.0278169917192402,0.0277920202651182,0.0278054318203641,0.0278556414707796,0.0279411591133653,0.0280605705804337,0.0282125114018316,0.0283956373689204,0.0286118409623974,0.0288564809240413,0.0291277112286767,0.0294240700254331,0.0297440859003908,0.0300862975037998,0.030449273519105,0.030831630807057,0.0312320490919659,0.0316496250667343,0.0320843193456094,0.0325332803040924,0.0329955261984345,0.0334701346289019,0.0339562293929068,0.0344529643834024,0.0349595048564137,0.0354750066830697,0.0359985945121725,0.0365296850275591,0.0370671096534123,0.037609225808709,0.038154802337892,0.038702523870263,0.0392510079742923,0.0397988296140583,0.0403445516220574,0.040886759532006,0.0414240987842542,0.0419546060628988,0.0424773736050564,0.0429917501314521,0.0434970452171259,0.0439927435464943,0.0444784893308254,0.0449540616383685,0.0454193429674486,0.0458742839037766,0.0463188568228042,0.0467517086450108,0.0471740992090812,0.0475859029077548,0.0479869360369644,0.048376956151796,0.0487556623028417,0.0491226945028711,0.0494776315805119,0.0498199874457913,0.0501486914710984,0.0504622103719354,0.0507610405315142,0.051044425039184,0.0513116010297143,0.051561835242249,0.0517944603969422,0.052008907977888,0.0522047332856267,0.0523816292337186,0.0525380269689277,0.0526742174272515,0.0527913503349489,0.0528895355905219,0.0529688931233632,0.053029535517195,0.0530715605245514,0.053095052578501,0.0531000910787432,0.0530867620956264,0.0530531921130299,0.0530011564866313,0.0529311649420167,0.0528433436311933,0.0527377831984706,0.0526145198818233,0.0524735233846019,0.0523146944354532,0.0521378738097769,0.0519425718758419,0.0517267561254062,0.0514923602638942,0.0512393443020024,0.0509677853936136,0.0506778874671369,0.0503699779876489,0.0500444929631208,0.0497019523128666,0.049342928532433,0.0489672226338271,0.0485751228617317,0.0481683554025571,0.0477473439429549,0.0473124369442275,0.0468639101569003,0.0464019734540166,0.0459267804084222,0.0454384393093444,0.0449370246901506,0.0444214484343474,0.0438923712672998,0.0433503990181186,0.0427956382048977,0.0422282617995915,0.0416485366186811,0.0410568505770711,0.0404537370849935,0.0398398936286139,0.039216191518996,0.0385827777062815,0.0379421006176141,0.0372955536348544,0.0366445224691072,0.0359903823548632,0.0353344518862862,0.0346779541708374,0.0340219880449264,0.0333675110692386,0.0327154288778272,0.0320667182887143,0.0314216508872037,0.030780646257181,0.0301440644810455,0.0295122259037601,0.0288854282866412,0.0282639616050058,0.0276481209539063,0.0270382181015877,0.0264350427529774,0.0258390442176907,0.0252502729675983,0.024669222592537,0.0240964275763148,0.0235324515594972,0.0229778710612064,0.0224332561347597,0.0218991498456391,0.0213760487614795,0.0208656069675093,0.0203673495894858,0.0198812215494879,0.0194074125977603,0.018946063385674,0.0184972782941281,0.0180611366079158,0.017637700526042,0.0172270190202929,0.0168292473673951,0.0164458155968372,0.0160751581328684,0.0157172054465929,0.0153718436284689,0.0150389137683703,0.0147182146242533,0.0144095080032273,0.0141125260290169,0.013826979308909,0.0135530542734756,0.0132907940384835,0.0130389543518763,0.0127972279265578,0.0125653115795854,0.0123429077698836,0.0121297267739941,0.0119254896501188,0.0117299319020604,0.0115428075200237,0.0113645429988463,0.0111946323803104,0.0110325209389177,0.0108780652014946,0.0107311321589379,0.0105915890159701,0.0104592911698154,0.01033406887437,0.010215712956766,0.0101039598166958,0.00999914371197687,0.00990007298461766,0.00980607145259657,0.00971638868014874,0.00963010056565214,0.00954608310724553,0.00946298781532134,0.00937922146675349,0.00929293335910192,0.0092018332311511,0.00910250099390389,0.00899279883363675,0.00887001033667192,0.00873143389487076,0.0085744942271665,0.00839686025745906,0.0081965623106772,0.00797210141512597,0.00772254365661882,0.00744610308977163,0.00714324454838958,0.00681714805338699,0.00646987214929921,0.00610404322821393,0.00572277723809814,0.005329593388841,0.00492832379890751,0.00452302198551457,0.00411787197323843,0.00371802019005874,0.00332804711247457,0.00295167347695944]
    },
    "mapping_distribution": {
        "percentage_of_uniquely_mapped_reads_in_chrM": 0.2807,
        "percentage_of_non-redundant_uniquely_mapped_reads_in_chrX": 0.0456,
        "percentage_of_non-redundant_uniquely_mapped_reads_in_chrY": 0.0014,
        "Percentage_of_non-redundant_uniquely_mapped_reads_in_autosome": {"chr1": 0.0861, "chr2": 0.0844, "chr3": 0.0682, "chr4": 0.06, "chr5": 0.0604, "chr6": 0.0578, "chr7": 0.0543, "chr8": 0.0507, "chr9": 0.0424, "chr10": 0.0495, "chr11": 0.0512, "chr12": 0.0474, "chr13": 0.0308, "chr14": 0.0323, "chr15": 0.0304, "chr16": 0.033, "chr17": 0.0351, "chr18": 0.0263, "chr19": 0.0263, "chr20": 0.0269, "chr21": 0.0138, "chr22": 0.0176}
    },
    "peak_analysis": {
        "peak_calling_software": "macs2",
        "peak_calling_parameters": "--keep-dup 1000 --nomodel --shift 0 --extsize 150",
        "peak_threshold_parameter": "qvaule",
        "peak_threshold": 0.01,
        "reads_percentage_under_peaks": 0.0793,
        "reads_number_under_peaks": 5281861,
        "peaks_number_in_promoter_regions": 15457,
        "peaks_number_in_non-promoter_regions": 48705
    },
    "saturation": {
        "sequence_depth": [5,10,20,30,40,50,60,70,80,90,100],
        "peaks_number": [2670,8462,18555,26519,33143,38853,43763,48007,56521,60579,64162],
        "percentage_of_peak_region_recaptured": [0.02,0.09,0.23,0.35,0.46,0.55,0.64,0.72,0.82,0.89,1]
    },
    "enrichment": {
        "enrichment_score_in_coding_promoter_regions": 4.15,
        "subsampled_10M_enrichment_score": 13.19,
        "percentage_of_background_RPKM_larger_than_0.3777": 0.155
    },
    "yield_distribution": {
        "total_reads": [0,1e+06,2e+06,3e+06,4e+06,5e+06,6e+06,7e+06,8e+06,9e+06,1e+07,1.1e+07,1.2e+07,1.3e+07,1.4e+07,1.5e+07,1.6e+07,1.7e+07,1.8e+07,1.9e+07,2e+07,2.1e+07,2.2e+07,2.3e+07,2.4e+07,2.5e+07,2.6e+07,2.7e+07,2.8e+07,2.9e+07,3e+07,3.1e+07,3.2e+07,3.3e+07,3.4e+07,3.5e+07,3.6e+07,3.7e+07,3.8e+07,3.9e+07,4e+07,4.1e+07,4.2e+07,4.3e+07,4.4e+07,4.5e+07,4.6e+07,4.7e+07,4.8e+07,4.9e+07,5e+07,5.1e+07,5.2e+07,5.3e+07,5.4e+07,5.5e+07,5.6e+07,5.7e+07,5.8e+07,5.9e+07,6e+07,6.1e+07,6.2e+07,6.3e+07,6.4e+07,6.5e+07,6.6e+07,6.7e+07,6.8e+07,6.9e+07,7e+07,7.1e+07,7.2e+07,7.3e+07,7.4e+07,7.5e+07,7.6e+07,7.7e+07,7.8e+07,7.9e+07,8e+07,8.1e+07,8.2e+07,8.3e+07,8.4e+07,8.5e+07,8.6e+07,8.7e+07,8.8e+07,8.9e+07,9e+07,9.1e+07,9.2e+07,9.3e+07,9.4e+07,9.5e+07,9.6e+07,9.7e+07,9.8e+07,9.9e+07,1e+08],
        "expected_distinction": [0,723036,1423026.5,2119206.5,2812447,3503098.5,4191370,4877410.5,5561303.5,6243153,6923009.5,7600947.5,8277006.5,8951238.5,9623677,10294363.5,10963332,11630603.5,12296214,12960184.5,13622530.5,14283289,14942470,15600094,16256183,16910749.5,17563809,18215382.5,18865476,19514111,20161297.5,20807047.5,21451376.5,22094294,22735809.5,23375927,24014647,24651995,25287984.5,25922624.5,26555922.5,27187889,27818531.5,28447861,29075884,29702608,30328043,30952194.5,31575072.5,32196681.5,32817030,33436127,34053975.5,34670585.5,35285963,35900113.5,36513043.5,37124760.5,37735269.5,38344576.2,38952688.5,39559611,40165349.6,40769909.9,41373297.5,41975517.8,42576576.3,43176478.3,43775229.1,44372833.7,44969297.5,45564625.3,46158822.2,46751893,47343842.8,47934676,48524397.5,49113012.1,49700524.2,50286938.5,50872259.4,51456491.4,52039639,52621706.4,53202697.9,53782617.9,54361470.6,54939260,55515990.4,56091665.9,56666290.4,57239868,57812402.6,58383898.2,58954358.7,59523788,60092189.7,60659567.9,61225926.1,61791268.1,62355597.6],
        "lower_0.95_confidnece_interval": [0,718261.8,1413373.1,2104700.7,2793122.9,3478982,4162491.1,4843794.9,5522973.4,6200136.7,6875328.7,7548625.6,8220067.8,8889703.1,9557567.6,10223700.6,10888139.5,11550898.9,12212019,12871516.9,13529412.9,14185739.5,14840508.8,15493739.9,16145454.2,16795665.2,17444386.3,18091640.8,18737432.3,19381785.6,20024705.6,20666208,21306306.5,21945010.8,22582329,23218268,23852824.6,24486027.7,25117887.7,25748414.5,26377616,27005502.4,27632081.4,28257362.4,28881353.7,29504061.2,30125495,30745661,31364569.5,31982223.8,32598633.4,33213805.7,33827745.9,34440462,35051960,35662245.9,36271326.9,36879208.7,37485897.5,38091398.4,38695718.6,39298863.8,39900839.2,40501650.4,41101303,41699802.2,42297153.6,42893362.2,43488433.3,44082372,44675183.4,45266872.3,45857443.7,46446902.4,47035253.3,47622501.1,48208650,48793705.1,49377670.8,49960552.8,50542352,51123076.4,51702729.2,52281314.1,52858834.9,53435298.7,54010707.6,54585062.4,55158371.4,55730639.5,56301867.6,56872070.1,57441247.1,58009370.3,58576474.1,59142569.5,59707647.1,60271706.7,60834776.1,61396827.8,61957879.7],
        "upper_0.95_confidnece_interval": [0,727842,1432745.9,2133812.2,2831904.8,3527382.2,4220449.2,4911259.4,5599899.7,6286467.7,6971021,7653632.1,8334339.6,9013199.9,9690243.7,10365514.8,11039043.8,11710858.1,12380989.5,13049462.9,13716289,14381509.3,15045131.7,15707178.2,16367671.2,17026622.4,17684049.3,18339970.5,18994394.7,19647339.8,20298821.1,20948846.8,21597434.2,22244592.8,22890333.1,23534656.5,24177567.2,24819087.2,25459233.2,26098013.2,26735434.3,27371507.3,28006239.7,28639643.8,29271724.5,29902490.9,30531952.8,31160115.4,31786988.3,32412577.3,33036889.8,33659936.4,34281718,34902246.7,35521528.2,36139567.7,36756370.9,37371947.2,37986300.4,38599436.7,39211364.8,39822088.3,40431613.5,41039946.2,41647091.9,42253056.4,42857844.9,43461463.1,44063916.1,44665209.3,45265347.9,45864336.9,46462181.4,47058886.3,47654456.9,48248897.2,48842213.1,49434408.5,50025488.5,50615456.3,51204320.2,51792081,52378744.2,52964314.8,53548798,54132194.7,54714511.5,55295756.1,55875928.1,56455031,57033071.9,57610044.4,58185956.4,58760844.3,59334681.1,59907463.7,60479209,61049925,61619591,62188242.4,62755868.5]
    },
    "peak_length_distribution": {
        "peak_length": [0,2.93542074363992,5.87084148727984,8.80626223091977,11.7416829745597,14.6771037181996,17.6125244618395,20.5479452054795,23.4833659491194,26.4187866927593,29.3542074363992,32.2896281800391,35.2250489236791,38.160469667319,41.0958904109589,44.0313111545988,46.9667318982387,49.9021526418787,52.8375733855186,55.7729941291585,58.7084148727984,61.6438356164384,64.5792563600783,67.5146771037182,70.4500978473581,73.385518590998,76.320939334638,79.2563600782779,82.1917808219178,85.1272015655577,88.0626223091976,90.9980430528376,93.9334637964775,96.8688845401174,99.8043052837573,102.739726027397,105.675146771037,108.610567514677,111.545988258317,114.481409001957,117.416829745597,120.352250489237,123.287671232877,126.223091976517,129.158512720157,132.093933463796,135.029354207436,137.964774951076,140.900195694716,143.835616438356,146.771037181996,149.706457925636,152.641878669276,155.577299412916,158.512720156556,161.448140900196,164.383561643836,167.318982387476,170.254403131115,173.189823874755,176.125244618395,179.060665362035,181.996086105675,184.931506849315,187.866927592955,190.802348336595,193.737769080235,196.673189823875,199.608610567515,202.544031311155,205.479452054795,208.414872798434,211.350293542074,214.285714285714,217.221135029354,220.156555772994,223.091976516634,226.027397260274,228.962818003914,231.898238747554,234.833659491194,237.769080234834,240.704500978474,243.639921722114,246.575342465753,249.510763209393,252.446183953033,255.381604696673,258.317025440313,261.252446183953,264.187866927593,267.123287671233,270.058708414873,272.994129158513,275.929549902153,278.864970645793,281.800391389432,284.735812133072,287.671232876712,290.606653620352,293.542074363992,296.477495107632,299.412915851272,302.348336594912,305.283757338552,308.219178082192,311.154598825832,314.090019569472,317.025440313112,319.960861056751,322.896281800391,325.831702544031,328.767123287671,331.702544031311,334.637964774951,337.573385518591,340.508806262231,343.444227005871,346.379647749511,349.315068493151,352.250489236791,355.185909980431,358.12133072407,361.05675146771,363.99217221135,366.92759295499,369.86301369863,372.79843444227,375.73385518591,378.66927592955,381.60469667319,384.54011741683,387.47553816047,390.41095890411,393.34637964775,396.281800391389,399.217221135029,402.152641878669,405.088062622309,408.023483365949,410.958904109589,413.894324853229,416.829745596869,419.765166340509,422.700587084149,425.636007827789,428.571428571429,431.506849315069,434.442270058708,437.377690802348,440.313111545988,443.248532289628,446.183953033268,449.119373776908,452.054794520548,454.990215264188,457.925636007828,460.861056751468,463.796477495108,466.731898238748,469.667318982387,472.602739726027,475.538160469667,478.473581213307,481.409001956947,484.344422700587,487.279843444227,490.215264187867,493.150684931507,496.086105675147,499.021526418787,501.956947162427,504.892367906067,507.827788649706,510.763209393346,513.698630136986,516.634050880626,519.569471624266,522.504892367906,525.440313111546,528.375733855186,531.311154598826,534.246575342466,537.181996086106,540.117416829746,543.052837573386,545.988258317025,548.923679060665,551.859099804305,554.794520547945,557.729941291585,560.665362035225,563.600782778865,566.536203522505,569.471624266145,572.407045009785,575.342465753425,578.277886497065,581.213307240704,584.148727984344,587.084148727984,590.019569471624,592.954990215264,595.890410958904,598.825831702544,601.761252446184,604.696673189824,607.632093933464,610.567514677104,613.502935420744,616.438356164384,619.373776908024,622.309197651663,625.244618395303,628.180039138943,631.115459882583,634.050880626223,636.986301369863,639.921722113503,642.857142857143,645.792563600783,648.727984344423,651.663405088063,654.598825831703,657.534246575342,660.469667318982,663.405088062622,666.340508806262,669.275929549902,672.211350293542,675.146771037182,678.082191780822,681.017612524462,683.953033268102,686.888454011742,689.823874755382,692.759295499022,695.694716242661,698.630136986301,701.565557729941,704.500978473581,707.436399217221,710.371819960861,713.307240704501,716.242661448141,719.178082191781,722.113502935421,725.048923679061,727.984344422701,730.919765166341,733.85518590998,736.79060665362,739.72602739726,742.6614481409,745.59686888454,748.53228962818,751.46771037182,754.40313111546,757.3385518591,760.27397260274,763.20939334638,766.14481409002,769.080234833659,772.015655577299,774.951076320939,777.886497064579,780.821917808219,783.757338551859,786.692759295499,789.628180039139,792.563600782779,795.499021526419,798.434442270059,801.369863013699,804.305283757339,807.240704500978,810.176125244618,813.111545988258,816.046966731898,818.982387475538,821.917808219178,824.853228962818,827.788649706458,830.724070450098,833.659491193738,836.594911937378,839.530332681018,842.465753424658,845.401174168298,848.336594911937,851.272015655577,854.207436399217,857.142857142857,860.078277886497,863.013698630137,865.949119373777,868.884540117417,871.819960861057,874.755381604697,877.690802348337,880.626223091976,883.561643835616,886.497064579256,889.432485322896,892.367906066536,895.303326810176,898.238747553816,901.174168297456,904.109589041096,907.045009784736,909.980430528376,912.915851272016,915.851272015656,918.786692759296,921.722113502935,924.657534246575,927.592954990215,930.528375733855,933.463796477495,936.399217221135,939.334637964775,942.270058708415,945.205479452055,948.140900195695,951.076320939335,954.011741682975,956.947162426614,959.882583170254,962.818003913894,965.753424657534,968.688845401174,971.624266144814,974.559686888454,977.495107632094,980.430528375734,983.365949119374,986.301369863014,989.236790606654,992.172211350294,995.107632093933,998.043052837573,1000.97847358121,1003.91389432485,1006.84931506849,1009.78473581213,1012.72015655577,1015.65557729941,1018.59099804305,1021.52641878669,1024.46183953033,1027.39726027397,1030.33268101761,1033.26810176125,1036.20352250489,1039.13894324853,1042.07436399217,1045.00978473581,1047.94520547945,1050.88062622309,1053.81604696673,1056.75146771037,1059.68688845401,1062.62230919765,1065.55772994129,1068.49315068493,1071.42857142857,1074.36399217221,1077.29941291585,1080.23483365949,1083.17025440313,1086.10567514677,1089.04109589041,1091.97651663405,1094.91193737769,1097.84735812133,1100.78277886497,1103.71819960861,1106.65362035225,1109.58904109589,1112.52446183953,1115.45988258317,1118.39530332681,1121.33072407045,1124.26614481409,1127.20156555773,1130.13698630137,1133.07240704501,1136.00782778865,1138.94324853229,1141.87866927593,1144.81409001957,1147.74951076321,1150.68493150685,1153.62035225049,1156.55577299413,1159.49119373777,1162.42661448141,1165.36203522505,1168.29745596869,1171.23287671233,1174.16829745597,1177.10371819961,1180.03913894325,1182.97455968689,1185.90998043053,1188.84540117417,1191.78082191781,1194.71624266145,1197.65166340509,1200.58708414873,1203.52250489237,1206.45792563601,1209.39334637965,1212.32876712329,1215.26418786693,1218.19960861057,1221.13502935421,1224.07045009785,1227.00587084149,1229.94129158513,1232.87671232877,1235.81213307241,1238.74755381605,1241.68297455969,1244.61839530333,1247.55381604697,1250.48923679061,1253.42465753425,1256.36007827789,1259.29549902153,1262.23091976517,1265.16634050881,1268.10176125245,1271.03718199609,1273.97260273973,1276.90802348337,1279.84344422701,1282.77886497065,1285.71428571429,1288.64970645793,1291.58512720157,1294.52054794521,1297.45596868885,1300.39138943249,1303.32681017613,1306.26223091977,1309.19765166341,1312.13307240705,1315.06849315068,1318.00391389432,1320.93933463796,1323.8747553816,1326.81017612524,1329.74559686888,1332.68101761252,1335.61643835616,1338.5518590998,1341.48727984344,1344.42270058708,1347.35812133072,1350.29354207436,1353.228962818,1356.16438356164,1359.09980430528,1362.03522504892,1364.97064579256,1367.9060665362,1370.84148727984,1373.77690802348,1376.71232876712,1379.64774951076,1382.5831702544,1385.51859099804,1388.45401174168,1391.38943248532,1394.32485322896,1397.2602739726,1400.19569471624,1403.13111545988,1406.06653620352,1409.00195694716,1411.9373776908,1414.87279843444,1417.80821917808,1420.74363992172,1423.67906066536,1426.614481409,1429.54990215264,1432.48532289628,1435.42074363992,1438.35616438356,1441.2915851272,1444.22700587084,1447.16242661448,1450.09784735812,1453.03326810176,1455.9686888454,1458.90410958904,1461.83953033268,1464.77495107632,1467.71037181996,1470.6457925636,1473.58121330724,1476.51663405088,1479.45205479452,1482.38747553816,1485.3228962818,1488.25831702544,1491.19373776908,1494.12915851272,1497.06457925636,1500],
        "density": [0,0,0,0,0,1.21053913554706e-16,9.11094824623098e-16,4.51670423341061e-15,1.97881948791973e-14,8.23347153941589e-14,3.27552095842273e-13,1.24564867465604e-12,4.52625133749399e-12,1.57011541093297e-11,5.19290721056679e-11,1.63472235150073e-10,4.88739321437469e-10,1.568006879606e-09,4.92032159154367e-09,1.48389469424913e-08,4.30154498889707e-08,1.19874039741178e-07,3.21216243001479e-07,8.27875465644464e-07,2.05300239565484e-06,4.90093699936968e-06,1.12693206362998e-05,2.49789113303057e-05,5.34204033151299e-05,0.000111895326829617,0.000234695606053442,0.000474573796769575,0.000925601596687618,0.00174224963582962,0.00316690964458692,0.00556288667247776,0.00944992039947232,0.015536820614192,0.0247431999457317,0.0382001002404889,0.0572182042247965,0.0832130507305584,0.11819451489731,0.163144408459961,0.218350180817985,0.283638260844113,0.357975057101857,0.439427343804857,0.525244688482403,0.612066909126765,0.696236989053034,0.774179060821081,0.842785996662933,0.899755134036813,0.943724329175983,0.973613998239737,0.99169685105856,0.999777287503652,1,0.994548240289677,0.985399680425588,0.97416334005499,0.96200333541641,0.949640470736082,0.937412596867374,0.925369880004717,0.913381432020842,0.901216154849631,0.888632514517127,0.875494946249547,0.861735322629105,0.847358506370006,0.832429718690358,0.817056937030492,0.801372158970363,0.785514323511648,0.769615690698335,0.753792594601361,0.738140728520355,0.722734506097651,0.707658465070999,0.692935093089061,0.67859158776722,0.664654916479939,0.651150232441678,0.638101395492419,0.625530518024449,0.613457097606064,0.601897277096902,0.590863626980612,0.580365619543315,0.570410715772496,0.561020515331278,0.552226988380337,0.544001802370154,0.536353947030509,0.52928963841362,0.522808253907998,0.51689726568646,0.5115268630019,0.506645254667242,0.50217582112603,0.498017258721472,0.494047572467287,0.490132210469967,0.486121841991674,0.481887276574112,0.477349614172849,0.472467063257541,0.467239468127102,0.461704447011056,0.455928884766965,0.449997560854958,0.444000990309855,0.438024428149871,0.432139506586742,0.426399263508974,0.420838037405512,0.41548403839811,0.410315100023025,0.405313708312969,0.400455408141802,0.395712681870422,0.391059002084213,0.386472915873602,0.381941738434248,0.377464215906115,0.373051454625985,0.368725559973269,0.364515792133391,0.360460441899863,0.356585423559057,0.352889080347229,0.349359037693768,0.345965942013947,0.342667810055186,0.339416918228555,0.336167858612404,0.33288517700333,0.329549088422925,0.326158113744835,0.322728042064525,0.319287312711265,0.31587426996117,0.312517461762502,0.309228756413731,0.306002418309871,0.302815266702073,0.299630844230686,0.296406504783718,0.293102114683726,0.289688791236132,0.286156080522716,0.282516203388711,0.278804451189436,0.27507701537984,0.271411476504896,0.267874026776998,0.264517026480829,0.261373179632547,0.258452462653201,0.255743104351262,0.253216121573202,0.250832291460612,0.248550058666053,0.246332786383365,0.244153972722278,0.241999534037911,0.23986877518079,0.237767357817843,0.235701803287435,0.23367549083556,0.231685641969513,0.229723112882186,0.227774103144437,0.225823161675569,0.223856671937905,0.221865983461001,0.219849503233871,0.217813324891601,0.215770403619358,0.213741061055335,0.211743786247355,0.209792946685758,0.207896914853011,0.206056658068951,0.204265489998768,0.202509955331641,0.200771691506317,0.1990300142447,0.197264908709274,0.195460074245991,0.193605664695744,0.191698554778682,0.189750185594282,0.187783461531822,0.185825413935542,0.183906225570614,0.182055210851976,0.180296762588254,0.178646928758843,0.177111225736642,0.175684112042167,0.174350262164309,0.173087436901016,0.171870407461167,0.170675167878188,0.169480337497557,0.168275461766611,0.167056543294905,0.165824004957744,0.164580332354658,0.163327827352356,0.162066960804381,0.160795595278496,0.159509116750272,0.158201314555891,0.156865714882199,0.155496019753156,0.154088058019377,0.152645197597945,0.151171246731004,0.149671503083112,0.148151120623646,0.146613331426572,0.145057942712431,0.14348053594678,0.141872700149214,0.140223440689488,0.138521643854413,0.136759192464424,0.134930599552661,0.133047479415046,0.131129879858002,0.129202810776222,0.127294741951563,0.125433826713349,0.12364440374785,0.12194443962769,0.120344342526314,0.118847281400389,0.117450838333071,0.116149555444601,0.114938554956371,0.113820950886256,0.112790195983559,0.111849885776503,0.111003867285004,0.110253298213768,0.109593720219417,0.109012804308911,0.108489288493162,0.107993401146083,0.107488792663475,0.106935730739436,0.106295097601888,0.105525566389678,0.104599889122093,0.103514294846249,0.102272310089679,0.100889932104349,0.0993937569017208,0.0978180446229024,0.0962009758252631,0.0945804440969807,0.092989823826648,0.0914542247008947,0.0899877696066963,0.0885923815927802,0.0872616712040278,0.0859696014468206,0.0846930161993052,0.0834120624293701,0.0821140128394932,0.0807962863059077,0.0794676750607309,0.07814764979449,0.0768639133015541,0.0756486223368588,0.0745338676298932,0.0735470781423239,0.0727113627698927,0.0720383345947923,0.0715083959270238,0.0711002004668784,0.0707838201356314,0.0705244997660838,0.0702867805138288,0.0700383845080536,0.0697532984573559,0.069413631404407,0.0690100359364444,0.0685407430516066,0.0680095260750268,0.0674199992071753,0.0667821604544413,0.0661028700598808,0.0653857546199068,0.0646334562467684,0.0638487606882266,0.0630357191353519,0.0622004406372603,0.06135137264781,0.0604990402856666,0.0596553450924378,0.0588326054497866,0.058042978426524,0.0573007595802482,0.0566102147987016,0.0559754439502513,0.055397316563104,0.0548732510079723,0.0543970793233937,0.0539590404198817,0.0535459711905044,0.053141776947453,0.052728254801564,0.0522863129218055,0.0517975740132913,0.0512427257624444,0.0506103697265744,0.0499014492608519,0.0491218255461951,0.0482849976960397,0.0474108946100094,0.046523791544801,0.0456496185654109,0.0448130281073442,0.0440346316928612,0.0433287966315379,0.0427023151404985,0.0421541309521511,0.0416807508531745,0.0412614594899572,0.0408796133536882,0.0405198997518011,0.0401696257791005,0.0398198649853733,0.0394657809055368,0.0391061739689137,0.0387424168850372,0.0383770282672384,0.0380121759436981,0.0376483963901942,0.0372835790258193,0.0369119310035975,0.0365263377598209,0.0361190988693116,0.0356834437061748,0.035214936032678,0.0347126105753024,0.0341796569722383,0.0336235235825678,0.0330553864628615,0.0324890123787483,0.0319391323181184,0.0314195250312475,0.0309442587973993,0.0305175967656318,0.0301372333907261,0.0297966032613289,0.0294848246222419,0.0291883190427969,0.0288926985399904,0.028584622574813,0.0282533640208287,0.0278918997600163,0.0274974406350729,0.0270714173302051,0.0266188407488078,0.0261479061655313,0.025671545329159,0.0252012566815049,0.0247484551126693,0.0243236586936002,0.0239357070241019,0.023591037877157,0.0232930792961334,0.0230418358788996,0.0228337529819914,0.0226619270029804,0.0225166935876601,0.0223866390564612,0.0222580098586377,0.0221196064234392,0.0219633965205965,0.0217846017854775,0.0215819863270304,0.0213576514313794,0.0211163653324138,0.0208645164111431,0.0206088286685575,0.0203550156147273,0.0201065690603613,0.0198638793932889,0.0196233983898069,0.019377533073618,0.0191177133883631,0.0188355904418371,0.0185248408326,0.0181827747658794,0.017811425604074,0.017417884655974,0.017013760352765,0.0166137849495128,0.0162337435676722,0.0158880359825757,0.0155887604939403,0.0153420199404539,0.015140865375769,0.0149752255065077,0.0148306995595958,0.0146908429225666,0.0145396625553483,0.0143639414519906,0.0141550697489736,0.013910155103542,0.013632299588902,0.0133300482234344,0.0130161207798428,0.0127070552762284,0.0124196306341358,0.0121660765632825,0.0119546904907765,0.0117888264540536,0.011666606417764,0.0115812163265683,0.0115217170337638,0.0114742610687591,0.0114235795680782,0.0113545881265463,0.0112539540799624,0.0111109181511377,0.010915979715491,0.0106728424421088,0.0103861119722083,0.0100639093018492,0.00971668285950078,0.00935589505874395,0.00899279754418689,0.00863747984372928,0.00829831136919467,0.00798180910929694,0.0076928693055357,0.00743521963821288,0.00721374068544972,0.00703124212225809,0.00688813201667206,0.00678534417224215,0.00672220961421164,0.00669597517042384,0.00670158288323585,0.00673180880878694,0.00677777644324686,0.00682977651993275,0.0068782570440514,0.00691480777483579,0.00693296025689954,0.00692658207128536,0.00689622270275152,0.00684309540173217,0.00676951750845669,0.00667846840911679,0.00657312506574423,0.00645658970908793,0.00633180251036767,0.00620158142237862,0.00606870198115677,0.00593592682806133,0.00580591847875808,0.0056812253955754,0.00556381026754129,0.00545364342349011,0.00534984095472485,0.00525048648533769,0.00515300418554558,0.00505468514033958,0.00495326052271039,0.00484740321125292,0.0047370522524452,0.00462348826673964,0.00450913616266123,0.004397125801381,0.00429127391732955,0.00419411703259313,0.00410662237994009,0.00402850137324728,0.00395819024008537,0.00389324087317648,0.00383092421503603,0.00376898152660405,0.00370645534093644,0.00364453552256754,0.00358736167650057,0.00354272584088813,0.00352314662879479,0.00355069702869088,0.00364543837128743,0.00383241698309629,0.00413760147221258,0.00458488320972834,0.00519218951638391,0.00596702316468569,0.0069019946569556,0.00797113075701568,0.00912786257475478,0.010305563839631,0.0114212822141058,0.0123699964504962,0.0130506775576752,0.0134006641820666,0.0133781013501874]
    }
  },
  "ENCODE PE refernce": {
    "data information": {
        "pipe version": "V3",
        "Docker tag": "target",
        "genome": "mm10",
        "read type": "Paired-end data"
    },
    "mapping stats": {
        "alignment program": "bwa",
        "alignment program version": "0.7.16a",
        "alignment program parameters": "bwa men",
        "post alignment program": "methylQA",
        "post alignment program version": "0.1.9",
        "post alignment program parameters": "methylQA atac",
        "total reads": [53521173,52841837,49568333,52179809,49691764,51407232,35924683,48416233,43503968,53935170,43919645,42278369,47548519,41466599,86375299,48785458,52082703,53078621,44189469,42364518,44562754,53140917,40755321,83791512,57818671,55554407,58056975,56463898,49454428,44646781,42044382,49443834,46776162,38328988,38505907,68272995,66315169,48348502,70091736,54588699,64152873,51902255,74018175,53219421,55307973,51449827,60200454,43550852,52300091,37376936,47681374,42220415,63001963,55360933],
        "mapped reads": [43153580,42352477,40229473,42084338,40291437,42716896,28866333,39886059,34766414,43002187,35234920,34848824,39069214,34125943,69416398,38266364,41765449,42472011,35204142,33813586,39790102,48179030,36332407,71257866,49597633,47494669,49211981,47609742,40952588,36620751,33314063,39567448,35867421,30385187,29796011,56853075,55132909,39816744,55306693,42147170,49206590,40035934,63486809,44917615,47228932,44222865,44153141,32173136,39219035,26981011,34913406,30567779,53595288,45140181],
        "uniquely mapped reads": [42735187,41950396,39892521,41671318,40023928,42419895,28655248,39664818,34533848,42699479,35029567,34684686,38882460,33902845,68757933,37885873,41382639,42061841,34913489,33524222,39513192,47902342,36053467,70701654,49250461,47163021,48894920,47293755,40607252,36297159,33036123,39224311,35600242,30109011,29557977,56293216,54708676,39509001,54921964,41772135,48755362,39678322,62946399,44506281,46848675,43877034,43882564,31955516,38963822,26790046,34708259,30315741,53112493,44697439],
        "non-redundant mapped reads": [39045290,38027740,36822477,37914795,35681662,38482560,25640256,35563680,30468442,35964313,29983078,29486250,34677104,28328824,59970088,33388823,37659611,37990545,31206803,30136814,35594598,42508046,32708309,56716944,43786201,41405826,42048361,39994718,33434773,29290122,29440814,33946966,31312483,27073004,25517372,45645909,41507394,29033906,38777600,27948067,41966430,34194715,55550516,39160672,40919632,38422470,38791422,29171658,35229878,23537123,29178926,25560630,48237836,38811180],
        "useful reads": [38286495,37046058,36092973,37322817,34664807,37588382,25198225,34770694,29541806,34877663,28883250,28465741,33727855,27478975,58755388,32416527,36901151,37180635,30266809,29333834,34757288,41636024,32125668,55044789,42760084,40230858,40522043,38435668,32166278,27815309,28378414,32719725,30043071,26312383,24306859,44010703,39473963,27272092,36609370,25903627,40664825,32947367,54382844,38030358,39852634,37534831,37743991,28338484,34346943,22692393,28743123,24922703,47262684,37207722],
        "useful single ends": [76572990,74092116,72185946,74645634,69329614,75176764,50396450,69541388,59083612,69755326,57766500,56931482,67455710,54957950,117510776,64833054,73802302,74361270,60533618,58667668,69514576,83272048,64251336,110089578,85520168,80461716,81044086,76871336,64332556,55630618,56756828,65439450,60086142,52624766,48613718,88021406,78947926,54544184,73218740,51807254,81329650,65894734,108765688,76060716,79705268,75069662,75487982,56676968,68693886,45384786,57486246,49845406,94525368,74415444]
    },
    "library complexity": {
        "after alignment PCR duplicates percentage": [0.0669999999999999,0.0590000000000001,0.0580000000000001,0.077,0.071,0.0649999999999999,0.096,0.081,0.081,0.117,0.092,0.105,0.074,0.134,0.098,0.083,0.071,0.075,0.071,0.074,0.071,0.088,0.079,0.124,0.083,0.082,0.075,0.081,0.123,0.111,0.0590000000000001,0.078,0.054,0.0669999999999999,0.0639999999999999,0.11,0.115,0.136,0.155,0.179,0.09,0.083,0.087,0.079,0.092,0.098,0.081,0.0580000000000001,0.069,0.086,0.153,0.141,0.0639999999999999,0.056]
    },
    "peak analysis": {
        "peak calling software": "macs2",
        "peak calling parameters": "--keep-dup 1000 --nomodel --shift 0 --extsize 150",
        "peak threshold parameter": "qvaule",
        "peak threshold": 0.01,
        "reads percentage under peaks": [0.1292,0.1194,0.1715,0.0954,0.1865,0.2143,0.1892,0.2739,0.1869,0.1951,0.2468,0.3124,0.376,0.2318,0.1301,0.1031,0.1242,0.1263,0.1443,0.1407,0.1777,0.2005,0.1508,0.1709,0.2131,0.2143,0.251,0.2289,0.1848,0.151,0.1377,0.1413,0.1771,0.1138,0.1571,0.1233,0.2416,0.1962,0.4163,0.3119,0.2875,0.319,0.1761,0.1324,0.183,0.1939,0.1985,0.1781,0.1754,0.1624,0.1951,0.1016,0.1347,0.1694],
        "reads number under peaks": [9811438,8774097,12265101,7065600,12796830,15947809,9432387,18834750,10926114,13473224,14096158,17550145,24926840,12577431,15169277,6629860,9084049,9307498,8645913,8176337,12230668,16525586,9593749,18636859,18014767,17054844,20096977,17386923,11681493,8269024,7742949,9158421,10534062,5929255,7531003,10730541,18703706,10522241,29572680,15697637,23050218,20696530,18984054,9978365,14435791,14406726,14822352,9985987,11925204,7290002,11093907,5020171,12607822,12463879],
        "peaks number in promoter regions": [14477,14145,14868,13733,14744,15237,14200,15584,14510,15211,15167,15650,16473,15521,14686,13440,14154,14226,14242,14038,15208,15512,14874,16104,16799,16911,17311,16685,14850,13967,15366,15635,16277,15258,13886,13856,13595,13099,15925,14592,17238,17159,15520,14358,15490,15269,14747,14510,14806,13866,14716,13077,15707,16417],
        "peaks number in non-promoter regions": [33335,30617,43721,24189,50064,53274,37693,63859,43847,52738,59340,68210,86462,57548,37472,24065,31615,32290,31700,29608,47013,55366,42303,57261,57169,60123,67570,59511,43994,36843,40786,43070,53779,34782,31055,28790,33074,27953,60339,45326,78165,74463,47085,31465,48264,46018,44445,35400,40301,28548,39066,18454,46668,54210]
    },
    "enrichment": {
        "enrichment ratio in coding promoter regions": [14.136,12.296,16.16,8.18,8.513,14.933,8.581,9.32,11.5,12.383,10.257,11.688,11.221,12.094,6.971,12.52,8.317,10.669,8.456,11.689,11.863,11.185,17.456,21.05,11.468,11.929,6.977,10.024,9.969,12.054,6.788,20.625,8.156,11.148,8.239,9.982,9.362,14.347,9.821,10.313,13.651,13.208,10.01,25.296,11.727,8.301,13.642,8.733,7.846,11.113,7.224,8.14,13.448,16.25],
        "subsampled 10M enrichment ratio": [20.0751960291,16.9365522834,28.5592416042,16.5750076566,15.6160587689,17.8926912918,17.2628079078,17.9767092513,17.5390101683,17.6032387948,19.2296282833,17.7392147705,16.9579954453,16.8918353327,14.9166314269,18.8505432093,18.0756918468,16.4321073588,15.5357255478,17.426875664,17.7421222561,16.8158703756,20.0085220044,22.2452856369,16.2795459894,18.5311481308,15.9968380655,18.0918133729,16.522756908,17.2040802699,14.5428255822,27.2038806667,14.4630142898,16.2649026692,14.8475900548,16.4251850656,16.1057058162,18.1814386273,16.9892634495,15.9255873558,24.954998221,19.210203775,16.1552163426,29.8046802599,17.1783351364,14.5727165738,18.7300320681,15.4182600148,14.7647221963,17.2786818249,14.2266656533,14.67821709,19.4827391372,21.3672015923],
        "percentage of background RPKM larger than 0.3777": [0.1912,0.2199,0.1426,0.2792,0.0829,0.0754,0.1392,0.0408,0.0754,0.0573,0.0376,0.02,0.0152,0.0591,0.2146,0.2441,0.1914,0.2066,0.1376,0.1606,0.0615,0.0422,0.1621,0.0699,0.0533,0.0491,0.0281,0.0433,0.1091,0.1455,0.1327,0.1118,0.0856,0.1363,0.16,0.2046,0.0866,0.106,0.0265,0.1336,0.069,0.0542,0.1241,0.1873,0.1068,0.0887,0.0587,0.0855,0.0722,0.1198,0.0634,0.2114,0.1007,0.1295]
    }
  }
} 
