Information for 17-GGTTATGAAA (Motif 13)

C A T G T A C G A G C T A C G T C T G A A C G T C T A G G T C A T G C A G C T A
Reverse Opposite:
C G A T A C G T C A G T G A T C G T C A G A C T T G C A T C G A A T G C G T A C
p-value:1e-217
log p-value:-5.017e+02
Information Content per bp:1.628
Number of Target Sequences with motif9528.0
Percentage of Target Sequences with motif13.21%
Number of Background Sequences with motif6862.8
Percentage of Background Sequences with motif9.58%
Average Position of motif in Targets100.0 +/- 56.2bp
Average Position of motif in Background101.5 +/- 59.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:1
Score:0.82
Offset:1
Orientation:forward strand
Alignment:GGTTATGAAA-
-RTTATGYAAB
 C A T G T A C G A G C T A C G T C T G A A C G T C T A G G T C A T G C A G C T A A C G T
A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:2
Score:0.82
Offset:0
Orientation:forward strand
Alignment:GGTTATGAAA
GGYAATGAAA
 C A T G T A C G A G C T A C G T C T G A A C G T C T A G G T C A T G C A G C T A
C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:3
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GGTTATGAAA
GGCMATGAAA
 C A T G T A C G A G C T A C G T C T G A A C G T C T A G G T C A T G C A G C T A
C T A G T A C G G A T C G T C A T C G A A C G T T C A G C G T A C G T A C G T A

CEBPA/MA0102.3/Jaspar

Match Rank:4
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:GGTTATGAAA-
NATTGTGCAAT
 C A T G T A C G A G C T A C G T C T G A A C G T C T A G G T C A T G C A G C T A A C G T
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:5
Score:0.77
Offset:1
Orientation:forward strand
Alignment:GGTTATGAAA-
-CYHATAAAAN
 C A T G T A C G A G C T A C G T C T G A A C G T C T A G G T C A T G C A G C T A A C G T
A C G T T A G C G A T C G T A C C T G A G C A T C T G A C G T A T G C A C G T A G A T C

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GGTTATGAAA-
HDGYAATGAAAN
 A C G T C A T G T A C G A G C T A C G T C T G A A C G T C T A G G T C A T G C A G C T A A C G T
G T C A C T G A T C A G G A T C T G C A T G C A A C G T T C A G C G T A C G T A C G T A G C T A

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GGTTATGAAA
KGCCATAAAA
 C A T G T A C G A G C T A C G T C T G A A C G T C T A G G T C A T G C A G C T A
C A T G T A C G G A T C G T A C T C G A C A G T C G T A C G T A G C T A G T C A

Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GGTTATGAAA
VGCCATAAAA
 C A T G T A C G A G C T A C G T C T G A A C G T C T A G G T C A T G C A G C T A
T C A G T A C G G A T C G T A C T C G A C G A T C T G A C G T A G C T A C G T A

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GGTTATGAAA
NCYAATAAAA
 C A T G T A C G A G C T A C G T C T G A A C G T C T A G G T C A T G C A G C T A
C T A G T A G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

HOXA10/MA0899.1/Jaspar

Match Rank:10
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GGTTATGAAA-
GGTAATAAAAA
 C A T G T A C G A G C T A C G T C T G A A C G T C T A G G T C A T G C A G C T A A C G T
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A