Information for 20-AGGTGGCGCT (Motif 18)

C G T A A C T G A C T G A C G T A C T G A C T G A G T C A C T G A G T C A G C T
Reverse Opposite:
C T G A A C T G A G T C A C T G G T A C A G T C C G T A A G T C A G T C A C G T
p-value:1e-98
log p-value:-2.279e+02
Information Content per bp:1.944
Number of Target Sequences with motif340.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif82.1
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets100.9 +/- 53.2bp
Average Position of motif in Background111.4 +/- 52.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----AGGTGGCGCT--
GCGGAGGTGTCGCCTC
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T A C T G A C T G A G T C A C T G A G T C A G C T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------AGGTGGCGCT----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T A C T G A C T G A G T C A C T G A G T C A G C T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCFL/MA1102.1/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AGGTGGCGCT
CACCAGGGGGCACC
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T A C T G A C T G A G T C A C T G A G T C A G C T
T A G C T C G A T A G C A G T C T G C A T A C G T C A G A C T G T A C G A C T G G T A C T C G A A T G C A G T C

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.68
Offset:-8
Orientation:forward strand
Alignment:--------AGGTGGCGCT-
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T A C T G A C T G A G T C A C T G A G T C A G C T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGGCGCT
NNCAGGTGNN---
 A C G T A C G T A C G T C G T A A C T G A C T G A C G T A C T G A C T G A G T C A C T G A G T C A G C T
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T

ZEB1/MA0103.3/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----AGGTGGCGCT
NNGCAGGTGNN---
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T A C T G A C T G A G T C A C T G A G T C A G C T
T A C G A T G C T A C G A G T C T C G A A T C G T C A G G A C T T C A G T A C G T A C G A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGGTGGCGCT
AGGTGTCA--
 C G T A A C T G A C T G A C G T A C T G A C T G A G T C A C T G A G T C A G C T
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.65
Offset:-8
Orientation:reverse strand
Alignment:--------AGGTGGCGCT--
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T A C T G A C T G A G T C A C T G A G T C A G C T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----AGGTGGCGCT
SDGCAGGTGCNS--
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T A C T G A C T G A G T C A C T G A G T C A G C T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGGTGGCGCT
AACAGGTGT----
 A C G T A C G T A C G T C G T A A C T G A C T G A C G T A C T G A C T G A G T C A C T G A G T C A G C T
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T