Information for 4-NTTGCCAR (Motif 3)

C A G T G A C T C G A T C A T G A T G C A G T C C G T A C T A G
Reverse Opposite:
G A T C G C A T C T A G A T C G G T A C C G T A C T G A G T C A
p-value:1e-939
log p-value:-2.164e+03
Information Content per bp:1.636
Number of Target Sequences with motif34179.0
Percentage of Target Sequences with motif47.39%
Number of Background Sequences with motif25404.8
Percentage of Background Sequences with motif35.46%
Average Position of motif in Targets100.3 +/- 55.5bp
Average Position of motif in Background100.2 +/- 61.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.44
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.91
Offset:1
Orientation:forward strand
Alignment:NTTGCCAR-
-TTGCCAAG
 C A G T G A C T C G A T C A T G A T G C A G T C C G T A C T A G A C G T
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:2
Score:0.85
Offset:2
Orientation:forward strand
Alignment:NTTGCCAR--
--TGCCAGCB
 C A G T G A C T C G A T C A T G A T G C A G T C C G T A C T A G A C G T A C G T
A C G T A C G T G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-NTTGCCAR-
NNTTGGCANN
 A C G T C A G T G A C T C G A T C A T G A T G C A G T C C G T A C T A G A C G T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.81
Offset:0
Orientation:forward strand
Alignment:NTTGCCAR-
CGTGCCAAG
 C A G T G A C T C G A T C A T G A T G C A G T C C G T A C T A G A C G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.79
Offset:0
Orientation:forward strand
Alignment:NTTGCCAR
TTTTCCA-
 C A G T G A C T C G A T C A T G A T G C A G T C C G T A C T A G
C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-NTTGCCAR-
ATTTTCCATT
 A C G T C A G T G A C T C G A T C A T G A T G C A G T C C G T A C T A G A C G T
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-NTTGCCAR-
ATTTTCCATT
 A C G T C A G T G A C T C G A T C A T G A T G C A G T C C G T A C T A G A C G T
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

NFATC1/MA0624.1/Jaspar

Match Rank:8
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-NTTGCCAR-
ATTTTCCATT
 A C G T C A G T G A C T C G A T C A T G A T G C A G T C C G T A C T A G A C G T
C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-NTTGCCAR-
ATTTTCCATT
 A C G T C A G T G A C T C G A T C A T G A T G C A G T C C G T A C T A G A C G T
C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.76
Offset:1
Orientation:forward strand
Alignment:NTTGCCAR--
-ATGCCAACC
 C A G T G A C T C G A T C A T G A T G C A G T C C G T A C T A G A C G T A C G T
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C