Information for 6-GTTTTTYTTGGC (Motif 4)

T C A G A G C T C A G T C A G T C A G T A G C T A G C T A G C T A C G T A C T G A T C G G T A C
Reverse Opposite:
C A T G A T G C G T A C G T C A C T G A T C G A T C G A G T C A G T C A G T C A T C G A A G T C
p-value:1e-545
log p-value:-1.255e+03
Information Content per bp:1.728
Number of Target Sequences with motif5991.0
Percentage of Target Sequences with motif8.31%
Number of Background Sequences with motif2950.3
Percentage of Background Sequences with motif4.12%
Average Position of motif in Targets101.7 +/- 54.1bp
Average Position of motif in Background101.2 +/- 59.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.89
Offset:-3
Orientation:forward strand
Alignment:---GTTTTTYTTGGC-
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T T C A G A G C T C A G T C A G T C A G T A G C T A G C T A G C T A C G T A C T G A T C G G T A C A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.74
Offset:6
Orientation:reverse strand
Alignment:GTTTTTYTTGGC---
------NTTGGCANN
 T C A G A G C T C A G T C A G T C A G T A G C T A G C T A G C T A C G T A C T G A T C G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:GTTTTTYTTGGC---
-----NNTTGGCANN
 T C A G A G C T C A G T C A G T C A G T A G C T A G C T A G C T A C G T A C T G A T C G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NFIC/MA0161.2/Jaspar

Match Rank:4
Score:0.69
Offset:4
Orientation:forward strand
Alignment:GTTTTTYTTGGC---
----TACTTGGCAGA
 T C A G A G C T C A G T C A G T C A G T A G C T A G C T A G C T A C G T A C T G A T C G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

HOXB13/MA0901.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTTTTTYTTGGC
-NTTTTATTGG-
 T C A G A G C T C A G T C A G T C A G T A G C T A G C T A G C T A C G T A C T G A T C G G T A C
A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTTTTTYTTGGC--
NNTTTNTTTTNGNNN
 A C G T T C A G A G C T C A G T C A G T C A G T A G C T A G C T A G C T A C G T A C T G A T C G G T A C A C G T A C G T
C G T A C G A T A G C T C G A T A C G T C G A T C G A T C G A T A G C T G C A T T A G C A T C G T A C G A T G C G A C T

PH0057.1_Hoxb13/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GTTTTTYTTGGC--
NNAATTTTATTGGNTN
 A C G T A C G T T C A G A G C T C A G T C A G T C A G T A G C T A G C T A G C T A C G T A C T G A T C G G T A C A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTTTTTYTTGGC
TGTTTAYTTAGC-
 A C G T T C A G A G C T C A G T C A G T C A G T A G C T A G C T A G C T A C G T A C T G A T C G G T A C
C G A T C T A G A C G T A C G T A C G T C G T A A G C T C G A T A G C T C G T A C T A G T A G C A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:GTTTTTYTTGGC--
------CTTGGCAA
 T C A G A G C T C A G T C A G T C A G T A G C T A G C T A G C T A C G T A C T G A T C G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

HOXA13/MA0650.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTTTTTYTTGGC
-TTTTTATTGG-
 T C A G A G C T C A G T C A G T C A G T A G C T A G C T A G C T A C G T A C T G A T C G G T A C
A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T