Information for 15-CTAAGCTGGC (Motif 15)

A G T C A G C T C T G A C G T A A C T G A G T C G A C T A C T G A C T G G T A C
Reverse Opposite:
C A T G A G T C A G T C C T G A C T A G A G T C C G A T G A C T C T G A A C T G
p-value:1e-10
log p-value:-2.312e+01
Information Content per bp:1.842
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.45%
Number of Background Sequences with motif299.0
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets97.6 +/- 56.3bp
Average Position of motif in Background96.1 +/- 62.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTAAGCTGGC
DCTCAGCAGG-
 A C G T A G T C A G C T C T G A C G T A A C T G A G T C G A C T A C T G A C T G G T A C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTAAGCTGGC-
---VGCTGGCA
 A G T C A G C T C T G A C G T A A C T G A G T C G A C T A C T G A C T G G T A C A C G T
A C G T A C G T A C G T T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTAAGCTGGC--
CACAGCAGGGGG
 A G T C A G C T C T G A C G T A A C T G A G T C G A C T A C T G A C T G G T A C A C G T A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTAAGCTGGC----
DCHCAGCAGGRGGCC
 A C G T A G T C A G C T C T G A C G T A A C T G A G T C G A C T A C T G A C T G G T A C A C G T A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTAAGCTGGC
NAHCAGCTGD-
 A C G T A G T C A G C T C T G A C G T A A C T G A G T C G A C T A C T G A C T G G T A C
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CTAAGCTGGC--
CCACACAGCAGGAGA
 A C G T A C G T A C G T A G T C A G C T C T G A C G T A A C T G A G T C G A C T A C T G A C T G G T A C A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Nr2e3/MA0164.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTAAGCTGGC
--AAGCTTG-
 A G T C A G C T C T G A C G T A A C T G A G T C G A C T A C T G A C T G G T A C
A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTAAGCTGGC--
CCACACAGCAGGAGA
 A C G T A C G T A C G T A G T C A G C T C T G A C G T A A C T G A G T C G A C T A C T G A C T G G T A C A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTAAGCTGGC--
GAGCACAGCAGGACA
 A C G T A C G T A C G T A G T C A G C T C T G A C G T A A C T G A G T C G A C T A C T G A C T G G T A C A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTAAGCTGGC
--CAGCTGNT
 A G T C A G C T C T G A C G T A A C T G A G T C G A C T A C T G A C T G G T A C
A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T