Information for 15-CTCAGTCTGAGC (Motif 21)

G T A C C G A T A T G C C G T A A T C G C A G T A T G C A G C T C T A G C G T A A T C G G T A C
Reverse Opposite:
C A T G T A G C G C A T G A T C T C G A A T C G G T C A A T G C C G A T A T C G G C T A A C T G
p-value:1e-8
log p-value:-1.955e+01
Information Content per bp:1.709
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif3.00%
Number of Background Sequences with motif272.1
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets90.0 +/- 44.8bp
Average Position of motif in Background100.3 +/- 68.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CTCAGTCTGAGC
--TWGTCTGV--
 G T A C C G A T A T G C C G T A A T C G C A G T A T G C A G C T C T A G C G T A A T C G G T A C
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTCAGTCTGAGC
--CTGTCTGG--
 G T A C C G A T A T G C C G T A A T C G C A G T A T G C A G C T C T A G C G T A A T C G G T A C
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

ZSCAN4/MA1155.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTCAGTCTGAGC-
TTTTCAGTGTGTGCA
 A C G T A C G T G T A C C G A T A T G C C G T A A T C G C A G T A T G C A G C T C T A G C G T A A T C G G T A C A C G T
G A C T G A C T C A G T G C A T T G A C T G C A C A T G A C G T C T A G G A C T A C T G C G A T A T C G A G T C C T G A

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTCAGTCTGAGC
--GAGSCCGAGC
 G T A C C G A T A T G C C G T A A T C G C A G T A T G C A G C T C T A G C G T A A T C G G T A C
A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTCAGTCTGAGC
VCCTCTCTGDDY
 G T A C C G A T A T G C C G T A A T C G C A G T A T G C A G C T C T A G C G T A A T C G G T A C
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTCAGTCTGAGC
--CCTGCTGAGH
 G T A C C G A T A T G C C G T A A T C G C A G T A T G C A G C T C T A G C G T A A T C G G T A C
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTCAGTCTGAGC-
---WDNCTGGGCA
 G T A C C G A T A T G C C G T A A T C G C A G T A T G C A G C T C T A G C G T A A T C G G T A C A C G T
A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGTCTGAGC--
NNTCCTGCTGTGNNN
 A C G T G T A C C G A T A T G C C G T A A T C G C A G T A T G C A G C T C T A G C G T A A T C G G T A C A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGTCTGAGC--
TCNCCTGCTGNGNNN
 A C G T G T A C C G A T A T G C C G T A A T C G C A G T A T G C A G C T C T A G C G T A A T C G G T A C A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGTCTGAGC--
GGTCANNGTGACCTN
 A C G T G T A C C G A T A T G C C G T A A T C G C A G T A T G C A G C T C T A G C G T A A T C G G T A C A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T