Information for 18-AGMATATTYTCC (Motif 29)

C T G A T A C G T G C A C G T A G A C T G T C A A C G T A C G T A G C T A C G T G T A C A G T C
Reverse Opposite:
T C A G C A T G C G T A T C G A C G T A G T C A A C G T C T G A C G A T A C G T A G T C A G C T
p-value:1e-6
log p-value:-1.601e+01
Information Content per bp:1.711
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif26.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets107.0 +/- 62.8bp
Average Position of motif in Background113.1 +/- 61.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.71
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.63
Offset:6
Orientation:forward strand
Alignment:AGMATATTYTCC-
------TTTTCCA
 C T G A T A C G T G C A C G T A G A C T G T C A A C G T A C G T A G C T A C G T G T A C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

NFATC3/MA0625.1/Jaspar

Match Rank:2
Score:0.61
Offset:5
Orientation:forward strand
Alignment:AGMATATTYTCC---
-----ATTTTCCATT
 C T G A T A C G T G C A C G T A G A C T G T C A A C G T A C G T A G C T A C G T G T A C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGMATATTYTCC
ATGAATATTC---
 A C G T C T G A T A C G T G C A C G T A G A C T G T C A A C G T A C G T A G C T A C G T G T A C A G T C
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGMATATTYTCC-----
AATCAATTGTTCCGCTA
 C T G A T A C G T G C A C G T A G A C T G T C A A C G T A C G T A G C T A C G T G T A C A G T C A C G T A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

PB0063.1_Sox13_1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGMATATTYTCC----
AANTTATTGTTCTNNA
 C T G A T A C G T G C A C G T A G A C T G T C A A C G T A C G T A G C T A C G T G T A C A G T C A C G T A C G T A C G T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.61
Offset:5
Orientation:forward strand
Alignment:AGMATATTYTCC---
-----ATTTTCCATT
 C T G A T A C G T G C A C G T A G A C T G T C A A C G T A C G T A G C T A C G T G T A C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.61
Offset:5
Orientation:forward strand
Alignment:AGMATATTYTCC---
-----ATTTTCCATT
 C T G A T A C G T G C A C G T A G A C T G T C A A C G T A C G T A G C T A C G T G T A C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

PB0183.1_Sry_2/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGMATATTYTCC-----
CNNNTATTGTTCNNNNN
 C T G A T A C G T G C A C G T A G A C T G T C A A C G T A C G T A G C T A C G T G T A C A G T C A C G T A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PB0072.1_Sox5_1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGMATATTYTCC----
NNTTTATTGTTCTNNN
 C T G A T A C G T G C A C G T A G A C T G T C A A C G T A C G T A G C T A C G T G T A C A G T C A C G T A C G T A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGMATATTYTCC
AAGGATATNTN--
 A C G T C T G A T A C G T G C A C G T A G A C T G T C A A C G T A C G T A G C T A C G T G T A C A G T C
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T A C G T