Information for 5-CGCTGTGGTT (Motif 4)

T A G C T A C G G T A C C A G T A T C G G C A T C A T G A C T G A C G T A C G T
Reverse Opposite:
T G C A T G C A T G A C G T A C C G T A T A G C G T C A C A T G A T G C A T C G
p-value:1e-18
log p-value:-4.203e+01
Information Content per bp:1.661
Number of Target Sequences with motif157.0
Percentage of Target Sequences with motif23.54%
Number of Background Sequences with motif5451.5
Percentage of Background Sequences with motif11.33%
Average Position of motif in Targets97.4 +/- 54.9bp
Average Position of motif in Background99.4 +/- 63.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.93
Offset:1
Orientation:forward strand
Alignment:CGCTGTGGTT-
-GCTGTGGTTT
 T A G C T A C G G T A C C A G T A T C G G C A T C A T G A C T G A C G T A C G T A C G T
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.89
Offset:2
Orientation:reverse strand
Alignment:CGCTGTGGTT--
--CTGTGGTTTN
 T A G C T A C G G T A C C A G T A T C G G C A T C A T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:CGCTGTGGTT-
-NNTGTGGTTT
 T A G C T A C G G T A C C A G T A T C G G C A T C A T G A C T G A C G T A C G T A C G T
A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.89
Offset:0
Orientation:forward strand
Alignment:CGCTGTGGTT-
GTCTGTGGTTT
 T A G C T A C G G T A C C A G T A T C G G C A T C A T G A C T G A C G T A C G T A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:CGCTGTGGTT--
NNHTGTGGTTWN
 T A G C T A C G G T A C C A G T A T C G G C A T C A T G A C T G A C G T A C G T A C G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Gfi1b/MA0483.1/Jaspar

Match Rank:6
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CGCTGTGGTT-
TGCTGTGATTT
 T A G C T A C G G T A C C A G T A T C G G C A T C A T G A C T G A C G T A C G T A C G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:CGCTGTGGTT-
--TTGCGGTTT
 T A G C T A C G G T A C C A G T A T C G G C A T C A T G A C T G A C G T A C G T A C G T
A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CGCTGTGGTT-
-TTTGCGGTTT
 T A G C T A C G G T A C C A G T A T C G G C A T C A T G A C T G A C G T A C G T A C G T
A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CGCTGTGGTT
-GCTGTG---
 T A G C T A C G G T A C C A G T A T C G G C A T C A T G A C T G A C G T A C G T
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CGCTGTGGTT-
-GCAGTGATTT
 T A G C T A C G G T A C C A G T A T C G G C A T C A T G A C T G A C G T A C G T A C G T
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T