Information for 8-YAGAMWTTSC (Motif 5)

A G T C C G T A T C A G C G T A G T A C G C T A A C G T A C G T T A G C A G T C
Reverse Opposite:
C T A G A T C G G T C A G T C A C G A T C A T G C G A T A G T C A C G T T C A G
p-value:1e-15
log p-value:-3.470e+01
Information Content per bp:1.619
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif6.00%
Number of Background Sequences with motif595.5
Percentage of Background Sequences with motif1.24%
Average Position of motif in Targets109.3 +/- 54.9bp
Average Position of motif in Background97.8 +/- 69.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---YAGAMWTTSC--
GVACAGNMTGTYCTB
 A C G T A C G T A C G T A G T C C G T A T C A G C G T A G T A C G C T A A C G T A C G T T A G C A G T C A C G T A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

PB0146.1_Mafk_2/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-YAGAMWTTSC----
GAAAAAATTGCAAGG
 A C G T A G T C C G T A T C A G C G T A G T A C G C T A A C G T A C G T T A G C A G T C A C G T A C G T A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

TEAD2/MA1121.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:YAGAMWTTSC----
-TCACATTCCAGCC
 A G T C C G T A T C A G C G T A G T A C G C T A A C G T A C G T T A G C A G T C A C G T A C G T A C G T A C G T
A C G T G A C T G A T C T C G A T G A C C T G A A G C T C G A T A G T C G A T C G C T A C A T G A T G C T A G C

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------YAGAMWTTSC----
NTGACTCANTTTTTCCANTN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A T C A G C G T A G T A C G C T A A C G T A C G T T A G C A G T C A C G T A C G T A C G T A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------YAGAMWTTSC-
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A T C A G C G T A G T A C G C T A A C G T A C G T T A G C A G T C A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-YAGAMWTTSC
CCAGACAG---
 A C G T A G T C C G T A T C A G C G T A G T A C G C T A A C G T A C G T T A G C A G T C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-YAGAMWTTSC
BCAGACWA---
 A C G T A G T C C G T A T C A G C G T A G T A C G C T A A C G T A C G T T A G C A G T C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:YAGAMWTTSC---
---GCATTCCAGN
 A G T C C G T A T C A G C G T A G T A C G C T A A C G T A C G T T A G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---YAGAMWTTSC--
GRACAGWMTGTYCTB
 A C G T A C G T A C G T A G T C C G T A T C A G C G T A G T A C G C T A A C G T A C G T T A G C A G T C A C G T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:YAGAMWTTSC-
---ACATTCCA
 A G T C C G T A T C A G C G T A G T A C G C T A A C G T A C G T T A G C A G T C A C G T
A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A