Information for 12-CCAATTGGCG (Motif 10)

A T G C G A T C C G T A T C G A A G C T C G A T T C A G T A C G G T A C C A T G
Reverse Opposite:
G T A C C A T G A T G C A G T C G C T A T C G A A G C T G C A T C T A G T A C G
p-value:1e-279
log p-value:-6.443e+02
Information Content per bp:1.445
Number of Target Sequences with motif13574.0
Percentage of Target Sequences with motif19.30%
Number of Background Sequences with motif10034.1
Percentage of Background Sequences with motif14.36%
Average Position of motif in Targets99.6 +/- 56.1bp
Average Position of motif in Background98.4 +/- 60.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0109.1_Nkx1-1/Jaspar

Match Rank:1
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----CCAATTGGCG---
TGCGCTAATTAGTGGGA
 A C G T A C G T A C G T A C G T A T G C G A T C C G T A T C G A A G C T C G A T T C A G T A C G G T A C C A T G A C G T A C G T A C G T
C G A T T A C G G T A C T C A G A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G C T C A T G T A C G A C T G T C G A

PH0089.1_Isx/Jaspar

Match Rank:2
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----CCAATTGGCG--
ACNNCTAATTAGNNNN
 A C G T A C G T A C G T A C G T A T G C G A T C C G T A T C G A A G C T C G A T T C A G T A C G G T A C C A T G A C G T A C G T
G C T A A T G C T A C G T G C A G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C T G C T G A A C T G C G A T

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CCAATTGGCG
CCGATTGGCT
 A T G C G A T C C G T A T C G A A G C T C G A T T C A G T A C G G T A C C A T G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

PH0098.1_Lhx8/Jaspar

Match Rank:4
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CCAATTGGCG---
ACCCCTAATTAGCGGTG
 A C G T A C G T A C G T A C G T A T G C G A T C C G T A T C G A A G C T C G A T T C A G T A C G G T A C C A T G A C G T A C G T A C G T
G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G

PB0150.1_Mybl1_2/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CCAATTGGCG--
CGACCAACTGCCGTG
 A C G T A C G T A C G T A T G C G A T C C G T A T C G A A G C T C G A T T C A G T A C G G T A C C A T G A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

PH0034.1_Gbx2/Jaspar

Match Rank:6
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CCAATTGGCG---
AGCGCTAATTAGCGATT
 A C G T A C G T A C G T A C G T A T G C G A T C C G T A T C G A A G C T C G A T T C A G T A C G G T A C C A T G A C G T A C G T A C G T
C G T A T A C G T G A C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C T A C G C T G A A C G T C A G T

PH0107.1_Msx2/Jaspar

Match Rank:7
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CCAATTGGCG--
GAAGACCAATTAGCGCT
 A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A T C G A A G C T C G A T T C A G T A C G G T A C C A T G A C G T A C G T
T C A G T G C A C T G A T A C G C T G A A T G C G A T C C G T A G T C A C G A T G A C T C T G A C A T G G A T C C A T G G A T C A G C T

PH0033.1_Gbx1/Jaspar

Match Rank:8
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CCAATTGGCG--
TGCCACTAATTAGTGTA
 A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A T C G A A G C T C G A T T C A G T A C G G T A C C A T G A C G T A C G T
G C A T C T A G A T G C T G A C T C G A G T A C G A C T G T C A C T G A A G C T A C G T C T G A A C T G A C G T A C T G A C G T G C T A

PH0127.1_Nobox/Jaspar

Match Rank:9
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----CCAATTGGCG--
GNTNNCTAATTAGNNCG
 A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A T C G A A G C T C G A T T C A G T A C G G T A C C A T G A C G T A C G T
T A C G C T G A C G A T C G T A T G A C A G T C G A C T C T G A C G T A G C A T A G C T C T G A T C A G A G T C A T C G T A G C A T C G

PH0097.1_Lhx6_2/Jaspar

Match Rank:10
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CCAATTGGCG---
TCCACTAATTAGCGGTT
 A C G T A C G T A C G T A C G T A T G C G A T C C G T A T C G A A G C T C G A T T C A G T A C G G T A C C A T G A C G T A C G T A C G T
G C A T T G A C G A T C T C G A G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G T C C A T G C T A G C G A T A C G T