Information for 10-CCAAAGTAAACA (Motif 12)

A T G C T G A C C G T A C T G A C T G A T C A G C G A T G T C A G T C A T C G A A G T C C G T A
Reverse Opposite:
C G A T C T A G A G C T C A G T C A G T G C T A A G T C G A C T A G C T C G A T A C T G T A C G
p-value:1e-259
log p-value:-5.974e+02
Information Content per bp:1.853
Number of Target Sequences with motif1513.0
Percentage of Target Sequences with motif2.15%
Number of Background Sequences with motif537.0
Percentage of Background Sequences with motif0.77%
Average Position of motif in Targets100.8 +/- 54.5bp
Average Position of motif in Background105.9 +/- 58.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--CCAAAGTAAACA--
TGCCAAAATAAACANN
 A C G T A C G T A T G C T G A C C G T A C T G A C T G A T C A G C G A T G T C A G T C A T C G A A G T C C G T A A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

Foxa2/MA0047.2/Jaspar

Match Rank:2
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:CCAAAGTAAACA
NCTAAGTAAACA
 A T G C T G A C C G T A C T G A C T G A T C A G C G A T G T C A G T C A T C G A A G T C C G T A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.82
Offset:2
Orientation:forward strand
Alignment:CCAAAGTAAACA
--AAAGTAAACA
 A T G C T G A C C G T A C T G A C T G A T C A G C G A T G T C A G T C A T C G A A G T C C G T A
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.82
Offset:2
Orientation:forward strand
Alignment:CCAAAGTAAACA
--AAAGTAAACA
 A T G C T G A C C G T A C T G A C T G A T C A G C G A T G T C A G T C A T C G A A G T C C G T A
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1/MA0148.3/Jaspar

Match Rank:5
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:CCAAAGTAAACA----
-CAAAGTAAACANNNN
 A T G C T G A C C G T A C T G A C T G A T C A G C G A T G T C A G T C A T C G A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer

Match Rank:6
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:CCAAAGTAAACA
GCTAARTAAACA
 A T G C T G A C C G T A C T G A C T G A T C A G C G A T G T C A G T C A T C G A A G T C C G T A
A T C G G A T C G C A T T C G A G C T A T C G A G C A T G T C A C G T A G T C A G A T C G C T A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:7
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:CCAAAGTAAACA---
NCWRWGTAAACANSV
 A T G C T G A C C G T A C T G A C T G A T C A G C G A T G T C A G T C A T C G A A G T C C G T A A C G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

MF0005.1_Forkhead_class/Jaspar

Match Rank:8
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:CCAAAGTAAACA
---AAATAAACA
 A T G C T G A C C G T A C T G A C T G A T C A G C G A T G T C A G T C A T C G A A G T C C G T A
A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

FOXC2/MA0846.1/Jaspar

Match Rank:9
Score:0.78
Offset:2
Orientation:forward strand
Alignment:CCAAAGTAAACA--
--TAAGTAAACAAA
 A T G C T G A C C G T A C T G A C T G A T C A G C G A T G T C A G T C A T C G A A G T C C G T A A C G T A C G T
A C G T A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:10
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:CCAAAGTAAACA
--WAAGTAAAYA
 A T G C T G A C C G T A C T G A C T G A T C A G C G A T G T C A G T C A T C G A A G T C C G T A
A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A