Information for 23-BTAATGGGCC (Motif 17)

A G T C A C G T C G T A T G C A G C A T C T A G C T A G T C A G T G A C G A T C
Reverse Opposite:
C T A G A C T G A G T C G A T C G A T C C G T A A C G T C G A T T G C A T C A G
p-value:1e-61
log p-value:-1.427e+02
Information Content per bp:1.562
Number of Target Sequences with motif4955.0
Percentage of Target Sequences with motif7.05%
Number of Background Sequences with motif3876.8
Percentage of Background Sequences with motif5.55%
Average Position of motif in Targets99.4 +/- 57.0bp
Average Position of motif in Background97.3 +/- 58.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BSX/MA0876.1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:BTAATGGGCC
NTAATTGG--
 A G T C A C G T C G T A T G C A G C A T C T A G C T A G T C A G T G A C G A T C
A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:2
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-BTAATGGGCC
GKTAATGR---
 A C G T A G T C A C G T C G T A T G C A G C A T C T A G C T A G T C A G T G A C G A T C
A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:BTAATGGGCC
NTAATTGN--
 A G T C A C G T C G T A T G C A G C A T C T A G C T A G T C A G T G A C G A T C
A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.73
Offset:0
Orientation:forward strand
Alignment:BTAATGGGCC
CTAATKGV--
 A G T C A C G T C G T A T G C A G C A T C T A G C T A G T C A G T G A C G A T C
A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:5
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-BTAATGGGCC
GCTAATTGCT-
 A C G T A G T C A C G T C G T A T G C A G C A T C T A G C T A G T C A G T G A C G A T C
A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T A C G T

GSX2/MA0893.1/Jaspar

Match Rank:6
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-BTAATGGGCC
NTTAATTAGN-
 A C G T A G T C A C G T C G T A T G C A G C A T C T A G C T A G T C A G T G A C G A T C
C A G T A G C T C G A T C G T A C G T A G C A T C A G T C T G A T A C G C A G T A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:7
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-BTAATGGGCC
NNTAATTANN-
 A C G T A G T C A C G T C G T A T G C A G C A T C T A G C T A G T C A G T G A C G A T C
A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T A C G T

PDX1/MA0132.2/Jaspar

Match Rank:8
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:BTAATGGGCC
CTAATTAN--
 A G T C A C G T C G T A T G C A G C A T C T A G C T A G T C A G T G A C G A T C
A G T C A C G T C G T A C G T A A C G T A C G T C T G A A T G C A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-BTAATGGGCC
GTTAATGGCC-
 A C G T A G T C A C G T C G T A T G C A G C A T C T A G C T A G T C A G T G A C G A T C
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T

GSX1/MA0892.1/Jaspar

Match Rank:10
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-BTAATGGGCC
NNTAATTAGN-
 A C G T A G T C A C G T C G T A T G C A G C A T C T A G C T A G T C A G T G A C G A T C
C G A T A G C T G C A T C G T A C G T A A G C T C A G T C T G A T A C G C A T G A C G T