Information for 12-AAGTCAACATTA (Motif 12)

T G C A C G T A T C A G G A C T T G A C G T C A T G C A G A T C C G T A C A G T G A C T G C T A
Reverse Opposite:
C G A T C T G A G T C A A C G T C T A G A C G T A C G T A C T G C G T A A G T C G C A T A C G T
p-value:1e-13
log p-value:-2.998e+01
Information Content per bp:1.709
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif3.22%
Number of Background Sequences with motif314.4
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets111.7 +/- 54.5bp
Average Position of motif in Background99.1 +/- 61.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXC2/MA0846.1/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AAGTCAACATTA
TAAGTAAACAAA-
 A C G T T G C A C G T A T C A G G A C T T G A C G T C A T G C A G A T C C G T A C A G T G A C T G C T A
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AAGTCAACATTA
TATGTAAATAT--
 A C G T T G C A C G T A T C A G G A C T T G A C G T C A T G C A G A T C C G T A C A G T G A C T G C T A
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AAGTCAACATTA
AAAAGTCAA-----
 A C G T A C G T T G C A C G T A T C A G G A C T T G A C G T C A T G C A G A T C C G T A C A G T G A C T G C T A
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AAGTCAACATTA
AAAGTAAACA---
 A C G T T G C A C G T A T C A G G A C T T G A C G T C A T G C A G A T C C G T A C A G T G A C T G C T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:5
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-AAGTCAACATTA
AAAGTAAACA---
 A C G T T G C A C G T A T C A G G A C T T G A C G T C A T G C A G A T C C G T A C A G T G A C T G C T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---AAGTCAACATTA
NCTAAGTAAACA---
 A C G T A C G T A C G T T G C A C G T A T C A G G A C T T G A C G T C A T G C A G A T C C G T A C A G T G A C T G C T A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AAGTCAACATTA
WAAGTAAAYA---
 A C G T T G C A C G T A T C A G G A C T T G A C G T C A T G C A G A T C C G T A C A G T G A C T G C T A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:8
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AAGTCAACATTA---
AAGTCAGCANTTTTN
 T G C A C G T A T C A G G A C T T G A C G T C A T G C A G A T C C G T A C A G T G A C T G C T A A C G T A C G T A C G T
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:9
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---AAGTCAACATTA
NCWRWGTAAACANSV
 A C G T A C G T A C G T T G C A C G T A T C A G G A C T T G A C G T C A T G C A G A T C C G T A C A G T G A C T G C T A
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

Foxd3/MA0041.1/Jaspar

Match Rank:10
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AAGTCAACATTA
AAACAAACATTC
 T G C A C G T A T C A G G A C T T G A C G T C A T G C A G A T C C G T A C A G T G A C T G C T A
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C