Information for 17-GGCTGGCAGCCA (Motif 14)

C A T G A T C G G A T C C G A T A C T G T A C G T A G C C G T A C A T G T A G C G T A C G T C A
Reverse Opposite:
C A G T A C T G A T C G G T A C C G A T A T C G A T G C A G T C C G T A C A T G T A G C G T A C
p-value:1e-11
log p-value:-2.681e+01
Information Content per bp:1.735
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif3.88%
Number of Background Sequences with motif502.2
Percentage of Background Sequences with motif1.04%
Average Position of motif in Targets96.1 +/- 47.5bp
Average Position of motif in Background93.6 +/- 66.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-GGCTGGCAGCCA-
TGGCAGNCTGCCAG
 A C G T C A T G A T C G G A T C C G A T A C T G T A C G T A G C C G T A C A T G T A G C G T A C G T C A A C G T
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GGCTGGCAGCCA
VGCTGGCA----
 C A T G A T C G G A T C C G A T A C T G T A C G T A G C C G T A C A T G T A G C G T A C G T C A
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GGCTGGCAGCCA
GSCTGTCACTCA
 C A T G A T C G G A T C C G A T A C T G T A C G T A G C C G T A C A T G T A G C G T A C G T C A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GGCTGGCAGCCA
-VBTGWCAGCB-
 C A T G A T C G G A T C C G A T A C T G T A C G T A G C C G T A C A T G T A G C G T A C G T C A
A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGCTGGCAGCCA-
AGGTGNCAGACAG
 C A T G A T C G G A T C C G A T A C T G T A C G T A G C C G T A C A T G T A G C G T A C G T C A A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGCTGGCAGCCA
AGGTGHCAGACA
 C A T G A T C G G A T C C G A T A C T G T A C G T A G C C G T A C A T G T A G C G T A C G T C A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGCTGGCAGCCA
-CTTGGCAA---
 C A T G A T C G G A T C C G A T A C T G T A C G T A G C C G T A C A T G T A G C G T A C G T C A
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGCTGGCAGCCA-
-SCTGTCAVTCAV
 C A T G A T C G G A T C C G A T A C T G T A C G T A G C C G T A C A T G T A G C G T A C G T C A A C G T
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGCTGGCAGCCA-
-NCTGTCAATCAN
 C A T G A T C G G A T C C G A T A C T G T A C G T A G C C G T A C A T G T A G C G T A C G T C A A C G T
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGCTGGCAGCCA
--YTGWCADY--
 C A T G A T C G G A T C C G A T A C T G T A C G T A G C C G T A C A T G T A G C G T A C G T C A
A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T