Information for 18-ATGTGTGGAA (Motif 17)

C G T A G A C T A T C G C G A T T A C G A C G T C A T G A C T G G T C A G T C A
Reverse Opposite:
C A G T C A G T T G A C G T A C T G C A A T G C G C T A T A G C C T G A G C A T
p-value:1e-9
log p-value:-2.124e+01
Information Content per bp:1.528
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif3.60%
Number of Background Sequences with motif532.1
Percentage of Background Sequences with motif1.10%
Average Position of motif in Targets82.2 +/- 51.1bp
Average Position of motif in Background97.5 +/- 61.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ATGTGTGGAA---
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T C G T A G A C T A T C G C G A T T A C G A C G T C A T G A C T G G T C A G T C A A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

TBR1/MA0802.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATGTGTGGAA
AGGTGTGAAA
 C G T A G A C T A T C G C G A T T A C G A C G T C A T G A C T G G T C A G T C A
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

Smad4/MA1153.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ATGTGTGGAA
-TGTCTAGA-
 C G T A G A C T A T C G C G A T T A C G A C G T C A T G A C T G G T C A G T C A
A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATGTGTGGAA
AGGTGTGAAA
 C G T A G A C T A T C G C G A T T A C G A C G T C A T G A C T G G T C A G T C A
C T G A C T A G A C T G G C A T C T A G G C A T A T C G C T G A C G T A G T C A

EOMES/MA0800.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATGTGTGGAA--
AAGGTGTGAAAAT
 A C G T C G T A G A C T A T C G C G A T T A C G A C G T C A T G A C T G G T C A G T C A A C G T A C G T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ATGTGTGGAA---
-NNTGTGGATTSS
 C G T A G A C T A T C G C G A T T A C G A C G T C A T G A C T G G T C A G T C A A C G T A C G T A C G T
A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

FOXH1/MA0479.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ATGTGTGGAA----
---TGTGGATTNNN
 C G T A G A C T A T C G C G A T T A C G A C G T C A T G A C T G G T C A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATGTGTGGAA
AAGGTGTKAA-
 A C G T C G T A G A C T A T C G C G A T T A C G A C G T C A T G A C T G G T C A G T C A
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ATGTGTGGAA---
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T A C G T C G T A G A C T A T C G C G A T T A C G A C G T C A T G A C T G G T C A G T C A A C G T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

TBX21/MA0690.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATGTGTGGAA
AAGGTGTGAA-
 A C G T C G T A G A C T A T C G C G A T T A C G A C G T C A T G A C T G G T C A G T C A
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T