Information for 18-GTCAGTGC (Motif 20)

A C T G G A C T T A G C C G T A C A T G G C A T A C T G T G A C
Reverse Opposite:
A C T G T G A C C G T A G T A C G C A T A T C G C T G A G T A C
p-value:1e-7
log p-value:-1.766e+01
Information Content per bp:1.634
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.37%
Number of Background Sequences with motif295.4
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets108.1 +/- 60.3bp
Average Position of motif in Background105.1 +/- 68.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GTCAGTGC---
RGTTAGTGCCCY
 A C G T A C T G G A C T T A G C C G T A C A T G G C A T A C T G T G A C A C G T A C G T A C G T
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTCAGTGC
NTGTCAN---
 A C G T A C G T A C T G G A C T T A G C C G T A C A T G G C A T A C T G T G A C
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T

NR1H4/MA1110.1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GTCAGTGC
NAGGTCATTGA
 A C G T A C G T A C G T A C T G G A C T T A G C C G T A C A T G G C A T A C T G T G A C
C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTCAGTGC--
TTAAGTGCTT
 A C T G G A C T T A G C C G T A C A T G G C A T A C T G T G A C A C G T A C G T
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GTCAGTGC
CAGGTAAGTAT
 A C G T A C G T A C G T A C T G G A C T T A G C C G T A C A T G G C A T A C T G T G A C
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTCAGTGC
RHTGWCAR---
 A C G T A C G T A C G T A C T G G A C T T A G C C G T A C A T G G C A T A C T G T G A C
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTCAGTGC
VBTGWCAGCB-
 A C G T A C G T A C G T A C T G G A C T T A G C C G T A C A T G G C A T A C T G T G A C
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTCAGTGC
GTCATN--
 A C T G G A C T T A G C C G T A C A T G G C A T A C T G T G A C
T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTCAGTGC
ACGTCA----
 A C G T A C G T A C T G G A C T T A G C C G T A C A T G G C A T A C T G T G A C
C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTCAGTGC----
AGGTCANTGACCTN
 A C G T A C G T A C T G G A C T T A G C C G T A C A T G G C A T A C T G T G A C A C G T A C G T A C G T A C G T
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C