Information for 19-CAGGATGA (Motif 23)

A G T C C G T A A T C G A C T G C G T A A C G T A C T G C G T A
Reverse Opposite:
C G A T A G T C C G T A A C G T A G T C A T G C A C G T A C T G
p-value:1e-6
log p-value:-1.542e+01
Information Content per bp:1.940
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif4.73%
Number of Background Sequences with motif1014.4
Percentage of Background Sequences with motif2.11%
Average Position of motif in Targets92.0 +/- 53.0bp
Average Position of motif in Background99.2 +/- 64.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CAGGATGA
ANCAGGATGT
 A C G T A C G T A G T C C G T A A T C G A C T G C G T A A C G T A C T G C G T A
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CAGGATGA
AACAGGAAGT
 A C G T A C G T A G T C C G T A A T C G A C T G C G T A A C G T A C T G C G T A
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CAGGATGA--
NDCAGGAARTNN
 A C G T A C G T A G T C C G T A A T C G A C T G C G T A A C G T A C T G C G T A A C G T A C G T
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CAGGATGA-
ACAGGAAGTG
 A C G T A G T C C G T A A T C G A C T G C G T A A C G T A C T G C G T A A C G T
T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CAGGATGA---
ACAGGATGTGGT
 A C G T A G T C C G T A A T C G A C T G C G T A A C G T A C T G C G T A A C G T A C G T A C G T
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CAGGATGA-
ACAGGAAGTG
 A C G T A G T C C G T A A T C G A C T G C G T A A C G T A C T G C G T A A C G T
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

SPDEF/MA0686.1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CAGGATGA-
ACCCGGATGTA
 A C G T A C G T A G T C C G T A A T C G A C T G C G T A A C G T A C T G C G T A A C G T
C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A

PB0181.1_Spdef_2/Jaspar

Match Rank:8
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CAGGATGA----
CTACTAGGATGTNNTN
 A C G T A C G T A C G T A C G T A G T C C G T A A T C G A C T G C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

PB0077.1_Spdef_1/Jaspar

Match Rank:9
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------CAGGATGA--
AANNATCCGGATGTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A C T G C G T A A C G T A C T G C G T A A C G T A C G T
T C G A C T G A C T G A C G T A C G T A G A C T T A G C T G A C A C T G A C T G C G T A G C A T T C A G G A C T C T G A A G T C

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CAGGATGA--
GAGCACAGCAGGACA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A C T G C G T A A C G T A C T G C G T A A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A