Information for 21-GCGCCGGCTC (Motif 24)

A T C G A G T C C T A G A G T C T G A C C T A G A T C G A G T C A C G T A T G C
Reverse Opposite:
A T C G T G C A A C T G A T G C A G T C A C T G T C A G G A T C A C T G A T G C
p-value:1e-6
log p-value:-1.516e+01
Information Content per bp:1.839
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif110.1
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets127.5 +/- 56.6bp
Average Position of motif in Background98.2 +/- 47.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GCGCCGGCTC
TGCGCAGGCGC
 A C G T A T C G A G T C C T A G A G T C T G A C C T A G A T C G A G T C A C G T A T G C
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GCGCCGGCTC
GCTCGGSCTC
 A T C G A G T C C T A G A G T C T G A C C T A G A T C G A G T C A C G T A T G C
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GCGCCGGCTC
CTGCGCATGCGC
 A C G T A C G T A T C G A G T C C T A G A G T C T G A C C T A G A T C G A G T C A C G T A T G C
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

NRF(NRF)/Promoter/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCGCCGGCTC--
GCGCATGCGCAC
 A T C G A G T C C T A G A G T C T G A C C T A G A T C G A G T C A C G T A T G C A C G T A C G T
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCGCCGGCTC-----
CGCGCCGGGTCACGTA
 A C G T A T C G A G T C C T A G A G T C T G A C C T A G A T C G A G T C A C G T A T G C A C G T A C G T A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCGCCGGCTC-
GGCCCCGCCCCC
 A C G T A T C G A G T C C T A G A G T C T G A C C T A G A T C G A G T C A C G T A T G C A C G T
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GCGCCGGCTC
-----NGCTN
 A T C G A G T C C T A G A G T C T G A C C T A G A T C G A G T C A C G T A T G C
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCGCCGGCTC
SNGCACCTGCHS
 A C G T A C G T A T C G A G T C C T A G A G T C T G A C C T A G A T C G A G T C A C G T A T G C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCGCCGGCTC
AGCGCGCC-----
 A C G T A C G T A C G T A T C G A G T C C T A G A G T C T G A C C T A G A T C G A G T C A C G T A T G C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCGCCGGCTC-----
AGAGCGGGGTCAAGTA
 A C G T A T C G A G T C C T A G A G T C T G A C C T A G A T C G A G T C A C G T A T G C A C G T A C G T A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A