Information for 2-TTGCCAAATA (Motif 3)

A G C T C A G T C A T G A T G C T G A C G C T A C G T A T C G A A G C T C G T A
Reverse Opposite:
G C A T T C G A A G C T A C G T C G A T A C T G A T C G G T A C G T C A T C G A
p-value:1e-26
log p-value:-6.185e+01
Information Content per bp:1.648
Number of Target Sequences with motif266.0
Percentage of Target Sequences with motif25.17%
Number of Background Sequences with motif6167.4
Percentage of Background Sequences with motif12.80%
Average Position of motif in Targets94.0 +/- 55.6bp
Average Position of motif in Background98.7 +/- 63.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-TTGCCAAATA
GGTGCCAAGT-
 A C G T A G C T C A G T C A T G A T G C T G A C G C T A C G T A T C G A A G C T C G T A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.83
Offset:0
Orientation:forward strand
Alignment:TTGCCAAATA
TTGCCAAG--
 A G C T C A G T C A T G A T G C T G A C G C T A C G T A T C G A A G C T C G T A
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-TTGCCAAATA
CGTGCCAAG--
 A C G T A G C T C A G T C A T G A T G C T G A C G C T A C G T A T C G A A G C T C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

NFIC/MA0161.2/Jaspar

Match Rank:4
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TTGCCAAATA
NNTGCCAAGNN
 A C G T A G C T C A G T C A T G A T G C T G A C G C T A C G T A T C G A A G C T C G T A
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A

PB0145.1_Mafb_2/Jaspar

Match Rank:5
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TTGCCAAATA--
CAATTGCAAAAATAT
 A C G T A C G T A C G T A G C T C A G T C A T G A T G C T G A C G C T A C G T A T C G A A G C T C G T A A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

CEBPA/MA0102.3/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TTGCCAAATA
ATTGCACAATA
 A C G T A G C T C A G T C A T G A T G C T G A C G C T A C G T A T C G A A G C T C G T A
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

CEBPE/MA0837.1/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTGCCAAATA
ATTGCGCAAT-
 A C G T A G C T C A G T C A T G A T G C T G A C G C T A C G T A T C G A A G C T C G T A
T C G A C G A T C A G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T A C G T

CEBPB/MA0466.2/Jaspar

Match Rank:8
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTGCCAAATA
ATTGCGCAAT-
 A C G T A G C T C A G T C A T G A T G C T G A C G C T A C G T A T C G A A G C T C G T A
T C G A C A G T A C G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T A C G T

CEBPD/MA0836.1/Jaspar

Match Rank:9
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTGCCAAATA
ATTGCGCAAT-
 A C G T A G C T C A G T C A T G A T G C T G A C G C T A C G T A T C G A A G C T C G T A
T C G A A C G T C A G T C A T G A G T C C T A G G A T C G T C A G T C A A G C T A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTGCCAAATA
GTTGCGCAAT-
 A C G T A G C T C A G T C A T G A T G C T G A C G C T A C G T A T C G A A G C T C G T A
T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T