Information for 6-TCTGGGCCAG (Motif 6)

C A G T G T A C A C G T C A T G T C A G A T C G G T A C G T A C G C T A T C A G
Reverse Opposite:
A G T C C G A T C A T G C A T G T A G C A G T C G T A C T G C A C A T G G T C A
p-value:1e-19
log p-value:-4.497e+01
Information Content per bp:1.603
Number of Target Sequences with motif267.0
Percentage of Target Sequences with motif25.26%
Number of Background Sequences with motif6978.7
Percentage of Background Sequences with motif14.49%
Average Position of motif in Targets105.2 +/- 57.1bp
Average Position of motif in Background100.8 +/- 63.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCTGGGCCAG
WDNCTGGGCA--
 A C G T A C G T C A G T G T A C A C G T C A T G T C A G A T C G G T A C G T A C G C T A T C A G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCTGGGCCAG---
AAWCTAGGTCARDNN
 A C G T A C G T C A G T G T A C A C G T C A T G T C A G A T C G G T A C G T A C G C T A T C A G A C G T A C G T A C G T
C G T A C G T A C G T A A G T C A G C T C T G A A C T G A C T G A G C T A G T C C G T A C T A G C T A G C T A G T G C A

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------TCTGGGCCAG
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T G T A C A C G T C A T G T C A G A T C G G T A C G T A C G C T A T C A G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TCTGGGCCAG
VBSYGTCTGG-----
 A C G T A C G T A C G T A C G T A C G T C A G T G T A C A C G T C A T G T C A G A T C G G T A C G T A C G C T A T C A G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCTGGGCCAG
CTGTCTGG-----
 A C G T A C G T A C G T C A G T G T A C A C G T C A T G T C A G A T C G G T A C G T A C G C T A T C A G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCTGGGCCAG
TTCTTGGAAAN
 A C G T C A G T G T A C A C G T C A T G T C A G A T C G G T A C G T A C G C T A T C A G
A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

Smad4/MA1153.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCTGGGCCAG
TGTCTAGA----
 A C G T A C G T C A G T G T A C A C G T C A T G T C A G A T C G G T A C G T A C G C T A T C A G
G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCTGGGCCAG
GGTCTGGCAT--
 A C G T A C G T C A G T G T A C A C G T C A T G T C A G A T C G G T A C G T A C G C T A T C A G
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T

NFIC/MA0161.2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCTGGGCCAG
TACTTGGCAGA
 A C G T C A G T G T A C A C G T C A T G T C A G A T C G G T A C G T A C G C T A T C A G
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TCTGGGCCAG
VCCTCTCTGDDY---
 A C G T A C G T A C G T A C G T A C G T C A G T G T A C A C G T C A T G T C A G A T C G G T A C G T A C G C T A T C A G
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C A C G T A C G T A C G T