Information for 21-WRCCAGAG (Motif 14)

G C T A C T G A A G T C A G T C C G T A A T C G G T C A A T C G
Reverse Opposite:
A T G C C A G T A T G C A C G T C T A G A C T G G A C T C G A T
p-value:1e-180
log p-value:-4.157e+02
Information Content per bp:1.785
Number of Target Sequences with motif7403.0
Percentage of Target Sequences with motif10.47%
Number of Background Sequences with motif5245.5
Percentage of Background Sequences with motif7.47%
Average Position of motif in Targets100.6 +/- 57.1bp
Average Position of motif in Background99.5 +/- 60.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-WRCCAGAG-
ATGCCAGACN
 A C G T G C T A C T G A A G T C A G T C C G T A A T C G G T C A A T C G A C G T
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:WRCCAGAG----
RHHCAGAGAGGB
 G C T A C T G A A G T C A G T C C G T A A T C G G T C A A T C G A C G T A C G T A C G T A C G T
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---WRCCAGAG------
CAAATCCAGACATCACA
 A C G T A C G T A C G T G C T A C T G A A G T C A G T C C G T A A T C G G T C A A T C G A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-WRCCAGAG--
AAACCACAGAN
 A C G T G C T A C T G A A G T C A G T C C G T A A T C G G T C A A T C G A C G T A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:WRCCAGAG----
--CCAGACRSVB
 G C T A C T G A A G T C A G T C C G T A A T C G G T C A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-WRCCAGAG-
AAACCACAGC
 A C G T G C T A C T G A A G T C A G T C C G T A A T C G G T C A A T C G A C G T
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:WRCCAGAG--
--CCAGACAG
 G C T A C T G A A G T C A G T C C G T A A T C G G T C A A T C G A C G T A C G T
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad4/MA1153.1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:WRCCAGAG-
-TCTAGACA
 G C T A C T G A A G T C A G T C C G T A A T C G G T C A A T C G A C G T
A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--WRCCAGAG--
NWAACCACADNN
 A C G T A C G T G C T A C T G A A G T C A G T C C G T A A T C G G T C A A T C G A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--WRCCAGAG
NAAACCACAG
 A C G T A C G T G C T A C T G A A G T C A G T C C G T A A T C G G T C A A T C G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G