Information for 13-WAACCACAVN (Motif 9)

G C T A T C G A T C G A T G A C A T G C C T G A T G A C C T G A T C A G T C G A
Reverse Opposite:
A G C T A G T C G A C T A C T G G A C T A T C G A C T G A G C T A G C T C G A T
p-value:1e-339
log p-value:-7.822e+02
Information Content per bp:1.519
Number of Target Sequences with motif4850.0
Percentage of Target Sequences with motif6.86%
Number of Background Sequences with motif2618.6
Percentage of Background Sequences with motif3.73%
Average Position of motif in Targets98.4 +/- 54.6bp
Average Position of motif in Background101.4 +/- 57.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-WAACCACAVN
NAAACCACAG-
 A C G T G C T A T C G A T C G A T G A C A T G C C T G A T G A C C T G A T C A G T C G A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.94
Offset:0
Orientation:forward strand
Alignment:WAACCACAVN
AAACCACANN
 G C T A T C G A T C G A T G A C A T G C C T G A T G A C C T G A T C A G T C G A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX3/MA0684.1/Jaspar

Match Rank:3
Score:0.93
Offset:0
Orientation:forward strand
Alignment:WAACCACAVN
AAACCGCAAA
 G C T A T C G A T C G A T G A C A T G C C T G A T G A C C T G A T C A G T C G A
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:WAACCACAVN
AAACCACAGC
 G C T A T C G A T C G A T G A C A T G C C T G A T G A C C T G A T C A G T C G A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX2/MA0511.2/Jaspar

Match Rank:5
Score:0.93
Offset:0
Orientation:forward strand
Alignment:WAACCACAVN
AAACCGCAA-
 G C T A T C G A T C G A T G A C A T G C C T G A T G A C C T G A T C A G T C G A
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:WAACCACAVN-
AAACCACAGAN
 G C T A T C G A T C G A T G A C A T G C C T G A T G A C C T G A T C A G T C G A A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-WAACCACAVN-
NWAACCACADNN
 A C G T G C T A T C G A T C G A T G A C A T G C C T G A T G A C C T G A T C A G T C G A A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

ZBTB7C/MA0695.1/Jaspar

Match Rank:8
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-WAACCACAVN-
GCGACCACCGAA
 A C G T G C T A T C G A T C G A T G A C A T G C C T G A T G A C C T G A T C A G T C G A A C G T
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A

Gfi1b/MA0483.1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:WAACCACAVN-
AAATCACAGCA
 G C T A T C G A T C G A T G A C A T G C C T G A T G A C C T G A T C A G T C G A A C G T
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

GLI2/MA0734.1/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-WAACCACAVN-
GCGACCACACTG
 A C G T G C T A T C G A T C G A T G A C A T G C C T G A T G A C C T G A T C A G T C G A A C G T
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G