Information for 12-CCACAAGCCT (Motif 15)

A G T C G A T C C G T A T G A C C T G A C G T A C A T G T A G C G A T C A C G T
Reverse Opposite:
T G C A C T A G A T C G G T A C G C A T G A C T A C T G G C A T C T A G T C A G
p-value:1e-8
log p-value:-1.894e+01
Information Content per bp:1.648
Number of Target Sequences with motif74.0
Percentage of Target Sequences with motif8.04%
Number of Background Sequences with motif1882.8
Percentage of Background Sequences with motif3.88%
Average Position of motif in Targets107.6 +/- 60.1bp
Average Position of motif in Background99.0 +/- 60.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----CCACAAGCCT
NWAACCACADNN--
A C G T A C G T A C G T A C G T A G T C G A T C C G T A T G A C C T G A C G T A C A T G T A G C G A T C A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CCACAAGCCT
AAACCACAGAN--
A C G T A C G T A C G T A G T C G A T C C G T A T G A C C T G A C G T A C A T G T A G C G A T C A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CCACAAGCCT
NAAACCACAG----
A C G T A C G T A C G T A C G T A G T C G A T C C G T A T G A C C T G A C G T A C A T G T A G C G A T C A C G T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCACAAGCCT
AAACCACANN---
A C G T A C G T A C G T A G T C G A T C C G T A T G A C C T G A C G T A C A T G T A G C G A T C A C G T
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCACAAGCCT
AAACCACAGC---
A C G T A C G T A C G T A G T C G A T C C G T A T G A C C T G A C G T A C A T G T A G C G A T C A C G T
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCACAAGCCT
ATCCAC------
A C G T A C G T A G T C G A T C C G T A T G A C C T G A C G T A C A T G T A G C G A T C A C G T
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CCACAAGCCT
ATTTCCCAGVAKSCY
A C G T A C G T A C G T A C G T A C G T A G T C G A T C C G T A T G A C C T G A C G T A C A T G T A G C G A T C A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCACAAGCCT
---CAAGCTT
A G T C G A T C C G T A T G A C C T G A C G T A C A T G T A G C G A T C A C G T
A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCACAAGCCT-
NNACTTGCCTT
A G T C G A T C C G T A T G A C C T G A C G T A C A T G T A G C G A T C A C G T A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCACAAGCCT
AAACCGCAAA---
A C G T A C G T A C G T A G T C G A T C C G T A T G A C C T G A C G T A C A T G T A G C G A T C A C G T
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T