Information for 1-TTTCTTGGCA (Motif 2)

G A C T A G C T G A C T A G T C A G C T G A C T C T A G T A C G T G A C G T C A
Reverse Opposite:
C A G T A C T G A T G C G A T C C T G A T C G A T C A G C T G A T C G A C T G A
p-value:1e-16
log p-value:-3.899e+01
Information Content per bp:1.655
Number of Target Sequences with motif225.0
Percentage of Target Sequences with motif24.46%
Number of Background Sequences with motif6749.5
Percentage of Background Sequences with motif13.91%
Average Position of motif in Targets97.2 +/- 53.1bp
Average Position of motif in Background99.4 +/- 59.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.88
Offset:1
Orientation:forward strand
Alignment:TTTCTTGGCA--
-TACTTGGCAGA
 G A C T A G C T G A C T A G T C A G C T G A C T C T A G T A C G T G A C G T C A A C G T A C G T
A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.84
Offset:2
Orientation:reverse strand
Alignment:TTTCTTGGCA--
--NNTTGGCANN
 G A C T A G C T G A C T A G T C A G C T G A C T C T A G T A C G T G A C G T C A A C G T A C G T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.80
Offset:3
Orientation:reverse strand
Alignment:TTTCTTGGCA--
---NTTGGCANN
 G A C T A G C T G A C T A G T C A G C T G A C T C T A G T A C G T G A C G T C A A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.80
Offset:3
Orientation:reverse strand
Alignment:TTTCTTGGCA-
---CTTGGCAA
 G A C T A G C T G A C T A G T C A G C T G A C T C T A G T A C G T G A C G T C A A C G T
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TTTCTTGGCA-
--GGTTGGCAT
 G A C T A G C T G A C T A G T C A G C T G A C T C T A G T A C G T G A C G T C A A C G T
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TTTCTTGGCA--
-TTCTTGGAAAN
 G A C T A G C T G A C T A G T C A G C T G A C T C T A G T A C G T G A C G T C A A C G T A C G T
A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------TTTCTTGGCA
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G C T G A C T A G T C A G C T G A C T C T A G T A C G T G A C G T C A
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:8
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TTTCTTGGCA-
NNNCTTTCCAGGAAA
 A C G T A C G T A C G T A C G T G A C T A G C T G A C T A G T C A G C T G A C T C T A G T A C G T G A C G T C A A C G T
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

Stat4/MA0518.1/Jaspar

Match Rank:9
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTTCTTGGCA-
NNNTTTCCTGGAAA
 A C G T A C G T A C G T G A C T A G C T G A C T A G T C A G C T G A C T C T A G T A C G T G A C G T C A A C G T
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A

STAT3/MA0144.2/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TTTCTTGGCA-
CTTCTGGGAAA
 G A C T A G C T G A C T A G T C A G C T G A C T C T A G T A C G T G A C G T C A A C G T
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A