Information for 15-AGCACAGAACAG (Motif 20)

C T G A A C T G G T A C G T C A A G T C C G T A A C T G T G C A C T G A T A G C C G T A T A C G
Reverse Opposite:
A T G C C G A T A T C G A G C T A C G T A G T C A C G T T C A G C A G T C A T G G T A C A G C T
p-value:1e-5
log p-value:-1.341e+01
Information Content per bp:1.761
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.17%
Number of Background Sequences with motif293.4
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets95.6 +/- 52.6bp
Average Position of motif in Background97.4 +/- 75.3bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AGCACAGAACAG-
CGAAGCACACAAAATA
 A C G T A C G T A C G T C T G A A C T G G T A C G T C A A G T C C G T A A C T G T G C A C T G A T A G C C G T A T A C G A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGCACAGAACAG
--CCAGGAACAG
 C T G A A C T G G T A C G T C A A G T C C G T A A C T G T G C A C T G A T A G C C G T A T A C G
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGCACAGAACAG
--CACAGN----
 C T G A A C T G G T A C G T C A A G T C C G T A A C T G T G C A C T G A T A G C C G T A T A C G
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGCACAGAACAG----
AACACCAAAACAAAGGA
 A C G T C T G A A C T G G T A C G T C A A G T C C G T A A C T G T G C A C T G A T A G C C G T A T A C G A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGCACAGAACAG-
-RHHCAGAGAGGB
 C T G A A C T G G T A C G T C A A G T C C G T A A C T G T G C A C T G A T A G C C G T A T A C G A C G T
A C G T T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGCACAGAACAG
AAACCACAGC----
 A C G T A C G T C T G A A C T G G T A C G T C A A G T C C G T A A C T G T G C A C T G A T A G C C G T A T A C G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AGCACAGAACAG---
-----GGAACAGCCG
 C T G A A C T G G T A C G T C A A G T C C G T A A C T G T G C A C T G A T A G C C G T A T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C T G T G C A G T C A A T G C C G T A A T C G A T G C A G T C C T A G

PB0123.1_Foxl1_2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGCACAGAACAG----
ATATCAAAACAAAACA
 C T G A A C T G G T A C G T C A A G T C C G T A A C T G T G C A C T G A T A G C C G T A T A C G A C G T A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGCACAGAACAG
AAACCACAGAN---
 A C G T A C G T C T G A A C T G G T A C G T C A A G T C C G T A A C T G T G C A C T G A T A G C C G T A T A C G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGCACAGAACAG---
ATGTCACAACAACAC
 C T G A A C T G G T A C G T C A A G T C C G T A A C T G T G C A C T G A T A G C C G T A T A C G A C G T A C G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C