Information for 6-CACAGGCTGTGC (Motif 9)

T A G C G T C A T A G C C G T A C A T G A T C G T A G C G C A T A T C G C A G T A T C G A T G C
Reverse Opposite:
T A C G T A G C G T C A T A G C C G T A A T C G T A G C G T A C G C A T A T C G C A G T A T C G
p-value:1e-10
log p-value:-2.358e+01
Information Content per bp:1.521
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.48%
Number of Background Sequences with motif414.0
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets96.6 +/- 53.7bp
Average Position of motif in Background101.9 +/- 61.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CACAGGCTGTGC
CACAGN------
 T A G C G T C A T A G C C G T A C A T G A T C G T A G C G C A T A T C G C A G T A T C G A T G C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CACAGGCTGTGC---------
-YCAGGCWCAGTACCAGGCTC
 T A G C G T C A T A G C C G T A C A T G A T C G T A G C G C A T A T C G C A G T A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CACAGGCTGTGC--
GVACAGNMTGTYCTB
 A C G T T A G C G T C A T A G C C G T A C A T G A T C G T A G C G C A T A T C G C A G T A T C G A T G C A C G T A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CACAGGCTGTGC-
-ACAGGATGTGGT
 T A G C G T C A T A G C C G T A C A T G A T C G T A G C G C A T A T C G C A G T A T C G A T G C A C G T
A C G T T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CACAGGCTGTGC
AACAGGAAGT--
 T A G C G T C A T A G C C G T A C A T G A T C G T A G C G C A T A T C G C A G T A T C G A T G C
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CACAGGCTGTGC----
--CAGGCCNNGGCCNN
 T A G C G T C A T A G C C G T A C A T G A T C G T A G C G C A T A T C G C A G T A T C G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

KLF4/MA0039.3/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CACAGGCTGTGC
-NNAGGGTGTGG
 T A G C G T C A T A G C C G T A C A T G A T C G T A G C G C A T A T C G C A G T A T C G A T G C
A C G T C T A G T A G C C G T A C T A G A C T G T C A G G A C T C A T G A G C T A C T G A C T G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CACAGGCTGTGC
-BCAGACWA---
 T A G C G T C A T A G C C G T A C A T G A T C G T A G C G C A T A T C G C A G T A T C G A T G C
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CACAGGCTGTGC--
AGNACAGNCTGTTCTN
 A C G T A C G T T A G C G T C A T A G C C G T A C A T G A T C G T A G C G C A T A T C G C A G T A T C G A T G C A C G T A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CACAGGCTGTGC
TGCCCAGNHW----
 A C G T A C G T T A G C G T C A T A G C C G T A C A T G A T C G T A G C G C A T A T C G C A G T A T C G A T G C
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T