Information for 14-TTCAGCACACAA (Motif 14)

A C G T A C G T A T G C C G T A A C T G A G T C C G T A A G T C C G T A A G T C C G T A C G T A
Reverse Opposite:
C G A T A C G T A C T G A C G T A C T G A C G T C T A G A G T C C G A T A T C G T G C A C G T A
p-value:1e-10
log p-value:-2.376e+01
Information Content per bp:1.890
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif11.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets81.0 +/- 54.6bp
Average Position of motif in Background79.6 +/- 77.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:TTCAGCACACAA----
CGAAGCACACAAAATA
 A C G T A C G T A T G C C G T A A C T G A G T C C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TTCAGCACACAA----
AGCGGCACACACGCAA
 A C G T A C G T A T G C C G T A A C T G A G T C C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTCAGCACACAA---
ATTTGCATACAATGG
 A C G T A C G T A T G C C G T A A C T G A G T C C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TTCAGCACACAA------
---CTCACACAATGGCGC
 A C G T A C G T A T G C C G T A A C T G A G T C C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TTCAGCACACAA-
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G A G T C C G T A A G T C C G T A A G T C C G T A C G T A A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTCAGCACACAA--
TACATGTGCACATAAAA
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G A G T C C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0044.1_Mtf1_1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTCAGCACACAA---
NNTTTGCACACGGCCC
 A C G T A C G T A C G T A T G C C G T A A C T G A G T C C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTCAGCACACAA
-WAAGTAAAYA-
 A C G T A C G T A T G C C G T A A C T G A G T C C G T A A G T C C G T A A G T C C G T A C G T A
A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TTCAGCACACAA
--TBGCACGCAA
 A C G T A C G T A T G C C G T A A C T G A G T C C G T A A G T C C G T A A G T C C G T A C G T A
A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

FOXO3/MA0157.2/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TTCAGCACACAA
----GTAAACAA
 A C G T A C G T A T G C C G T A A C T G A G T C C G T A A G T C C G T A A G T C C G T A C G T A
A C G T A C G T A C G T A C G T C T A G A C G T T G C A G T C A G T C A G T A C G T C A C G T A