Information for 9-GGAGCGTATT (Motif 16)

A C T G A C T G C G T A A C T G A G T C A T C G A C G T C T G A C G A T A C G T
Reverse Opposite:
G T C A C G T A G A C T G T C A A T G C T C A G A G T C A C G T A G T C G T A C
p-value:1e-9
log p-value:-2.287e+01
Information Content per bp:1.852
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.96%
Number of Background Sequences with motif46.5
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets110.6 +/- 51.5bp
Average Position of motif in Background96.4 +/- 52.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCGTATT
CGGAGC-----
 A C G T A C T G A C T G C G T A A C T G A G T C A T C G A C G T C T G A C G A T A C G T
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

PB0143.1_Klf7_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GGAGCGTATT---
NNNTNGGGCGTATNNTN
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C A T C G A C G T C T G A C G A T A C G T A C G T A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGAGCGTATT
-CAGCC----
 A C T G A C T G C G T A A C T G A G T C A T C G A C G T C T G A C G A T A C G T
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGAGCGTATT-----
TNNTTTCGTATTNNANN
 A C G T A C G T A C T G A C T G C G T A A C T G A G T C A T C G A C G T C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GGAGCGTATT-
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C A T C G A C G T C T G A C G A T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGAGCGTATT--
NNTGTGGATTSS
 A C T G A C T G C G T A A C T G A G T C A T C G A C G T C T G A C G A T A C G T A C G T A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

KLF14/MA0740.1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GGAGCGTATT-
AAGGGGGCGTGGCC
 A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C A T C G A C G T C T G A C G A T A C G T A C G T
C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C

PB0154.1_Osr1_2/Jaspar

Match Rank:8
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------GGAGCGTATT
NNNTTAGGTAGCNTNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C A T C G A C G T C T G A C G A T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T A C G T

KLF13/MA0657.1/Jaspar

Match Rank:9
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------GGAGCGTATT--
CAAAAAGGGGCGTGGCAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C A T C G A C G T C T G A C G A T A C G T A C G T A C G T
G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCGTATT
NGAAGC-----
 A C G T A C T G A C T G C G T A A C T G A G T C A T C G A C G T C T G A C G A T A C G T
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T