Information for 17-CAGGCCTGGGTT (Motif 18)

A G T C C T G A A C T G A T C G T A G C A G T C A C G T A C T G C A T G A T C G A C G T A G C T
Reverse Opposite:
T C G A T G C A T A G C G T A C A G T C C G T A C T A G A T C G A T G C A G T C G A C T A C T G
p-value:1e-9
log p-value:-2.181e+01
Information Content per bp:1.777
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif3.34%
Number of Background Sequences with motif217.7
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets120.6 +/- 47.5bp
Average Position of motif in Background92.2 +/- 56.5bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CAGGCCTGGGTT
-AGGCCTNG---
 A G T C C T G A A C T G A T C G T A G C A G T C A C G T A C T G C A T G A T C G A C G T A G C T
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CAGGCCTGGGTT
-AGGCCTAG---
 A G T C C T G A A C T G A T C G T A G C A G T C A C G T A C T G C A T G A T C G A C G T A G C T
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CAGGCCTGGGTT--
CAGGCCNNGGCCNN
 A G T C C T G A A C T G A T C G T A G C A G T C A C G T A C T G C A T G A T C G A C G T A G C T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CAGGCCTGGGTT
GGGGCTYGKCTGGGA-
 A C G T A C G T A C G T A C G T A G T C C T G A A C T G A T C G T A G C A G T C A C G T A C T G C A T G A T C G A C G T A G C T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CAGGCCTGGGTT
--GGTCTGGCAT
 A G T C C T G A A C T G A T C G T A G C A G T C A C G T A C T G C A T G A T C G A C G T A G C T
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAGGCCTGGGTT-
ACATGCCCGGGCAT
 A C G T A G T C C T G A A C T G A T C G T A G C A G T C A C G T A C T G C A T G A T C G A C G T A G C T A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CAGGCCTGGGTT
----GCTGTG--
 A G T C C T G A A C T G A T C G T A G C A G T C A C G T A C T G C A T G A T C G A C G T A G C T
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CAGGCCTGGGTT-
GTCATGCHTGRCTGS
 A C G T A C G T A G T C C T G A A C T G A T C G T A G C A G T C A C G T A C T G C A T G A T C G A C G T A G C T A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CAGGCCTGGGTT
--WDNCTGGGCA
 A G T C C T G A A C T G A T C G T A G C A G T C A C G T A C T G C A T G A T C G A C G T A G C T
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CAGGCCTGGGTT------
---GYCTGGYYTNTGTCA
 A G T C C T G A A C T G A T C G T A G C A G T C A C G T A C T G C A T G A T C G A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A