Information for 6-CTCATAGTTATT (Motif 8)

G T A C A C G T A G T C C G T A A C G T C G T A A C T G A C G T A C G T C G T A C A G T A C G T
Reverse Opposite:
C G T A G C T A A C G T C G T A C G T A A G T C A C G T C G T A C G A T A C T G C G T A A C T G
p-value:1e-11
log p-value:-2.758e+01
Information Content per bp:1.908
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets98.6 +/- 57.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HMBOX1/MA0895.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CTCATAGTTATT
--ACTAGTTAAC
 G T A C A C G T A G T C C G T A A C G T C G T A A C T G A C G T A C G T C G T A C A G T A C G T
A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

PB0172.1_Sox1_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTCATAGTTATT-
CTATAATTGTTAGCG
 A C G T A C G T G T A C A C G T A G T C C G T A A C G T C G T A A C T G A C G T A C G T C G T A C A G T A C G T A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

PB0159.1_Rfx4_2/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTCATAGTTATT--
TACCCTAGTTACCGA
 A C G T G T A C A C G T A G T C C G T A A C G T C G T A A C T G A C G T A C G T C G T A C A G T A C G T A C G T A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

PB0081.1_Tcf1_1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTCATAGTTATT-----
NNNTTAGTTAACTNANN
 G T A C A C G T A G T C C G T A A C G T C G T A A C T G A C G T A C G T C G T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTCATAGTTATT---
NCNTTTGTTATTTNN
 G T A C A C G T A G T C C G T A A C G T C G T A A C T G A C G T A C G T C G T A C A G T A C G T A C G T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PH0167.1_Tcf1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTCATAGTTATT-----
NTTTTAGTTAACNNAGN
 G T A C A C G T A G T C C G T A A C G T C G T A A C T G A C G T A C G T C G T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

POU6F1/MA0628.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTCATAGTTATT
--ATTAATTAAT
 G T A C A C G T A G T C C G T A A C G T C G T A A C T G A C G T A C G T C G T A C A G T A C G T
A C G T A C G T T C G A G A C T G C A T G T C A G T C A A C G T C A G T C G T A C T G A A G C T

PH0028.1_En1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTCATAGTTATT----
GNATTAATTAGTTNNC
 G T A C A C G T A G T C C G T A A C G T C G T A A C T G A C G T A C G T C G T A C A G T A C G T A C G T A C G T A C G T A C G T
A C T G G A T C T G C A G A C T G A C T C G T A C G T A A G C T A G C T C T G A C T A G A C G T A C G T A G T C A T C G A G T C

PB0062.1_Sox12_1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTCATAGTTATT---
-TAATTGTTCTAAAC
 G T A C A C G T A G T C C G T A A C G T C G T A A C T G A C G T A C G T C G T A C A G T A C G T A C G T A C G T A C G T
A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PH0168.1_Hnf1b/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTCATAGTTATT----
ANNNCTAGTTAACNGNN
 A C G T G T A C A C G T A G T C C G T A A C G T C G T A A C T G A C G T A C G T C G T A C A G T A C G T A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T