Information for 7-AGGCATTGTATG (Motif 9)

C G T A A C T G A C T G A G T C C G T A A C G T A C G T A C T G A C G T C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T G T C A G T A C C G T A G T C A A C G T A C T G A G T C A G T C A C G T
p-value:1e-11
log p-value:-2.758e+01
Information Content per bp:1.919
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets137.8 +/- 17.1bp
Average Position of motif in Background103.8 +/- 44.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AGGCATTGTATG-----
--CCATTGTATGCAAAT
 C G T A A C T G A C T G A G T C C G T A A C G T A C G T A C T G A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

SOX13/MA1120.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGGCATTGTATG
NNCCATTGTNN-
 C G T A A C T G A C T G A G T C C G T A A C G T A C G T A C T G A C G T C G T A A C G T A C T G
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGGCATTGTATG-
-GGGATTGCATNN
 C G T A A C T G A C T G A G T C C G T A A C G T A C G T A C T G A C G T C G T A A C G T A C T G A C G T
A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGGCATTGTATG
--CCATTGTTYB
 C G T A A C T G A C T G A G T C C G T A A C G T A C G T A C T G A C G T C G T A A C G T A C T G
A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGGCATTGTATG--
NNNCCATTGTGTNAN
 A C G T C G T A A C T G A C T G A G T C C G T A A C G T A C G T A C T G A C G T C G T A A C G T A C T G A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGGCATTGTATG
AGAGGAAGTG----
 A C G T A C G T C G T A A C T G A C T G A G T C C G T A A C G T A C G T A C T G A C G T C G T A A C G T A C T G
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AGGCATTGTATG--
----NTTTTATGAC
 C G T A A C T G A C T G A G T C C G T A A C G T A C G T A C T G A C G T C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGGCATTGTATG
--CCWTTGTYYB
 C G T A A C T G A C T G A G T C C G T A A C G T A C G T A C T G A C G T C G T A A C G T A C T G
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGGCATTGTATG
AGGCCTNG----
 C G T A A C T G A C T G A G T C C G T A A C G T A C G T A C T G A C G T C G T A A C G T A C T G
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGGCATTGTATG
-NCCATTGTTY-
 C G T A A C T G A C T G A G T C C G T A A C G T A C G T A C T G A C G T C G T A A C G T A C T G
A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T