Information for 2-YTGCCAAGANTN (Motif 2)

G A T C C G A T A C T G A T G C G T A C G T C A C T G A T C A G G C T A A T C G G C A T T G A C
Reverse Opposite:
A C T G C G T A T A G C C G A T A G T C A G C T A C G T A C T G T A C G T G A C C G T A C T A G
p-value:1e-35
log p-value:-8.083e+01
Information Content per bp:1.604
Number of Target Sequences with motif324.0
Percentage of Target Sequences with motif27.20%
Number of Background Sequences with motif6495.1
Percentage of Background Sequences with motif13.48%
Average Position of motif in Targets99.7 +/- 51.9bp
Average Position of motif in Background100.2 +/- 62.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-YTGCCAAGANTN
NNTGCCAAGNN--
 A C G T G A T C C G A T A C T G A T G C G T A C G T C A C T G A T C A G G C T A A T C G G C A T T G A C
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-YTGCCAAGANTN
GGTGCCAAGT---
 A C G T G A T C C G A T A C T G A T G C G T A C G T C A C T G A T C A G G C T A A T C G G C A T T G A C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.89
Offset:0
Orientation:forward strand
Alignment:YTGCCAAGANTN
TTGCCAAG----
 G A T C C G A T A C T G A T G C G T A C G T C A C T G A T C A G G C T A A T C G G C A T T G A C
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-YTGCCAAGANTN
CGTGCCAAG----
 A C G T G A T C C G A T A C T G A T G C G T A C G T C A C T G A T C A G G C T A A T C G G C A T T G A C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.77
Offset:0
Orientation:forward strand
Alignment:YTGCCAAGANTN
ATGCCAACC---
 G A T C C G A T A C T G A T G C G T A C G T C A C T G A T C A G G C T A A T C G G C A T T G A C
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:6
Score:0.72
Offset:1
Orientation:forward strand
Alignment:YTGCCAAGANTN
-TGCCAGCB---
 G A T C C G A T A C T G A T G C G T A C G T C A C T G A T C A G G C T A A T C G G C A T T G A C
A C G T G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.72
Offset:0
Orientation:forward strand
Alignment:YTGCCAAGANTN
ATGCCCACC---
 G A T C C G A T A C T G A T G C G T A C G T C A C T G A T C A G G C T A A T C G G C A T T G A C
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.71
Offset:0
Orientation:forward strand
Alignment:YTGCCAAGANTN
CTGCCCGCA---
 G A T C C G A T A C T G A T G C G T A C G T C A C T G A T C A G G C T A A T C G G C A T T G A C
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:YTGCCAAGANTN
-TGCCCAGNHW-
 G A T C C G A T A C T G A T G C G T A C G T C A C T G A T C A G G C T A A T C G G C A T T G A C
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:YTGCCAAGANTN-----
-TGCCAAAATAAACANN
 G A T C C G A T A C T G A T G C G T A C G T C A C T G A T C A G G C T A A T C G G C A T T G A C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A