Information for 14-CGGGGCCAGA (Motif 21)

G T A C C T A G A C T G A C T G C T A G G A T C A G T C G T C A A C T G T G C A
Reverse Opposite:
A C G T T G A C C A G T C T A G C T A G G A T C G T A C T G A C G A T C C A T G
p-value:1e-8
log p-value:-1.870e+01
Information Content per bp:1.806
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif3.69%
Number of Background Sequences with motif659.7
Percentage of Background Sequences with motif1.37%
Average Position of motif in Targets103.0 +/- 55.3bp
Average Position of motif in Background105.5 +/- 62.3bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CGGGGCCAGA
HAWGRGGCCM--
 A C G T A C G T G T A C C T A G A C T G A C T G C T A G G A T C A G T C G T C A A C T G T G C A
G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CGGGGCCAGA--
--ATGCCAGACN
 G T A C C T A G A C T G A C T G C T A G G A T C A G T C G T C A A C T G T G C A A C G T A C G T
A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CGGGGCCAGA---
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T G T A C C T A G A C T G A C T G C T A G G A T C A G T C G T C A A C T G T G C A A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CGGGGCCAGA
GGGGGCGGGGCC---
 A C G T A C G T A C G T A C G T A C G T G T A C C T A G A C T G A C T G C T A G G A T C A G T C G T C A A C T G T G C A
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CGGGGCCAGA---
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A C G T G T A C C T A G A C T G A C T G C T A G G A T C A G T C G T C A A C T G T G C A A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CGGGGCCAGA---
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T G T A C C T A G A C T G A C T G C T A G G A T C A G T C G T C A A C T G T G C A A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGGGGCCAGA--
AGGTGHCAGACA
 G T A C C T A G A C T G A C T G C T A G G A T C A G T C G T C A A C T G T G C A A C G T A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGGGGCCAGA-------
CAAATCCAGACATCACA
 G T A C C T A G A C T G A C T G C T A G G A T C A G T C G T C A A C T G T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGGGGCCAGA---
AGGTGNCAGACAG
 G T A C C T A G A C T G A C T G C T A G G A T C A G T C G T C A A C T G T G C A A C G T A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

PB0153.1_Nr2f2_2/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CGGGGCCAGA--
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C G T G T A C C T A G A C T G A C T G C T A G G A T C A G T C G T C A A C T G T G C A A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A