Information for 13-AGTGTGAA (Motif 22)

G C T A A T C G C G A T A T C G G C A T C T A G G C T A T C G A
Reverse Opposite:
A G C T C G A T A G T C C G T A T A G C C G T A A T G C C G A T
p-value:1e-7
log p-value:-1.771e+01
Information Content per bp:1.784
Number of Target Sequences with motif200.0
Percentage of Target Sequences with motif16.79%
Number of Background Sequences with motif5492.9
Percentage of Background Sequences with motif11.40%
Average Position of motif in Targets100.9 +/- 57.9bp
Average Position of motif in Background99.6 +/- 59.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-AGTGTGAA-
AGGTGTGAAA
 A C G T G C T A A T C G C G A T A T C G G C A T C T A G G C T A T C G A A C G T
C T G A C T A G A C T G G C A T C T A G G C A T A T C G C T G A C G T A G T C A

TBR1/MA0802.1/Jaspar

Match Rank:2
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-AGTGTGAA-
AGGTGTGAAA
 A C G T G C T A A T C G C G A T A T C G G C A T C T A G G C T A T C G A A C G T
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

TBX21/MA0690.1/Jaspar

Match Rank:3
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--AGTGTGAA
AAGGTGTGAA
 A C G T A C G T G C T A A T C G C G A T A T C G G C A T C T A G G C T A T C G A
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

EOMES/MA0800.1/Jaspar

Match Rank:4
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--AGTGTGAA---
AAGGTGTGAAAAT
 A C G T A C G T G C T A A T C G C G A T A T C G G C A T C T A G G C T A T C G A A C G T A C G T A C G T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:5
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-AGTGTGAA-
AGGTGTGAAM
 A C G T G C T A A T C G C G A T A T C G G C A T C T A G G C T A T C G A A C G T
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

PB0013.1_Eomes_1/Jaspar

Match Rank:6
Score:0.78
Offset:-5
Orientation:forward strand
Alignment:-----AGTGTGAA----
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T A C G T A C G T G C T A A T C G C G A T A T C G G C A T C T A G G C T A T C G A A C G T A C G T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--AGTGTGAA-
AAGGTGTGAAA
 A C G T A C G T G C T A A T C G C G A T A T C G G C A T C T A G G C T A T C G A A C G T
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

TBX20/MA0689.1/Jaspar

Match Rank:8
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--AGTGTGAA-
TAGGTGTGAAG
 A C G T A C G T G C T A A T C G C G A T A T C G G C A T C T A G G C T A T C G A A C G T
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

MGA/MA0801.1/Jaspar

Match Rank:9
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-AGTGTGAA
AGGTGTGA-
 A C G T G C T A A T C G C G A T A T C G G C A T C T A G G C T A T C G A
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T

TBX1/MA0805.1/Jaspar

Match Rank:10
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-AGTGTGAA
AGGTGTGA-
 A C G T G C T A A T C G C G A T A T C G G C A T C T A G G C T A T C G A
C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T