Information for 18-CGTCCACARMTA (Motif 25)

A G T C C A T G A C G T A G T C A G T C C G T A A G T C C G T A C T A G G T C A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A G T C A C G T A C T G A C G T A C T G A C T G C G T A G T A C A C T G
p-value:1e-5
log p-value:-1.291e+01
Information Content per bp:1.915
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets105.4 +/- 53.3bp
Average Position of motif in Background69.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGTCCACARMTA
-ATCCAC-----
 A G T C C A T G A C G T A G T C A G T C C G T A A G T C C G T A C T A G G T C A A C G T C G T A
A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGTCCACARMTA
NWAACCACADNN-
 A C G T A G T C C A T G A C G T A G T C A G T C C G T A A G T C C G T A C T A G G T C A A C G T C G T A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T

HINFP/MA0131.2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CGTCCACARMTA
CAACGTCCGCGG---
 A C G T A C G T A C G T A G T C C A T G A C G T A G T C A G T C C G T A A G T C C G T A C T A G G T C A A C G T C G T A
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CGTCCACARMTA--
--KCCAAAAATAGC
 A G T C C A T G A C G T A G T C A G T C C G T A A G T C C G T A C T A G G T C A A C G T C G T A A C G T A C G T
A C G T A C G T A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGTCCACARMTA
AAACCACAGAN-
 A G T C C A T G A C G T A G T C A G T C C G T A A G T C C G T A C T A G G T C A A C G T C G T A
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

GLI2/MA0734.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGTCCACARMTA
GCGACCACACTG-
 A C G T A G T C C A T G A C G T A G T C A G T C C G T A A G T C C G T A C T A G G T C A A C G T C G T A
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CGTCCACARMTA-
TACATGTGCACATAAAA
 A C G T A C G T A C G T A C G T A G T C C A T G A C G T A G T C A G T C C G T A A G T C C G T A C T A G G T C A A C G T C G T A A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

ZBTB7C/MA0695.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGTCCACARMTA
GCGACCACCGAA-
 A C G T A G T C C A T G A C G T A G T C A G T C C G T A A G T C C G T A C T A G G T C A A C G T C G T A
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CGTCCACARMTA--
--DCYAAAAATAGM
 A G T C C A T G A C G T A G T C A G T C C G T A A G T C C G T A C T A G G T C A A C G T C G T A A C G T A C G T
A C G T A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CGTCCACARMTA
YCCGCCCACGCN--
 A C G T A C G T A G T C C A T G A C G T A G T C A G T C C G T A A G T C C G T A C T A G G T C A A C G T C G T A
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T A C G T