Information for 21-SCMTYGCAKCGC (Motif 29)

A T C G A G T C G T C A A C G T A G T C A C T G A G T C C G T A A C G T A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G G T C A A C G T A C T G A G T C C T A G C G T A A C G T A C T G A T G C
p-value:1e-4
log p-value:-9.654e+00
Information Content per bp:1.875
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets109.5 +/- 33.8bp
Average Position of motif in Background142.3 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0055.1_Rfx4_1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--SCMTYGCAKCGC-
TACCATAGCAACGGT
 A C G T A C G T A T C G A G T C G T C A A C G T A G T C A C T G A G T C C G T A A C G T A G T C A C T G A G T C A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--SCMTYGCAKCGC-
CCGCATAGCAACGGA
 A C G T A C G T A T C G A G T C G T C A A C G T A G T C A C T G A G T C C G T A A C G T A G T C A C T G A G T C A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:SCMTYGCAKCGC--
GCCGCGCAGTGCGT
 A T C G A G T C G T C A A C G T A G T C A C T G A G T C C G T A A C G T A G T C A C T G A G T C A C G T A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------SCMTYGCAKCGC-----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C G T C A A C G T A G T C A C T G A G T C C G T A A C G T A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-SCMTYGCAKCGC
GGGATTGCATNN-
 A C G T A T C G A G T C G T C A A C G T A G T C A C T G A G T C C G T A A C G T A G T C A C T G A G T C
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:SCMTYGCAKCGC
--ATTGCATCAK
 A T C G A G T C G T C A A C G T A G T C A C T G A G T C C G T A A C G T A G T C A C T G A G T C
A C G T A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----SCMTYGCAKCGC
GTTGCCATGGCAAC--
 A C G T A C G T A C G T A C G T A T C G A G T C G T C A A C G T A G T C A C T G A G T C C G T A A C G T A G T C A C T G A G T C
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:SCMTYGCAKCGC-
---TTGCAACATN
 A T C G A G T C G T C A A C G T A G T C A C T G A G T C C G T A A C G T A G T C A C T G A G T C A C G T
A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:SCMTYGCAKCGC
SCCTAGCAACAG
 A T C G A G T C G T C A A C G T A G T C A C T G A G T C C G T A A C G T A G T C A C T G A G T C
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:SCMTYGCAKCGC
--ATTGCATCAT
 A T C G A G T C G T C A A C G T A G T C A C T G A G T C C G T A A C G T A G T C A C T G A G T C
A C G T A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T