Information for 20-AGCTWAGC (Motif 30)

C T G A A C T G G A T C A G C T C G T A C T G A A C T G A G T C
Reverse Opposite:
A C T G A G T C A G C T G C A T C T G A C T A G A G T C A G C T
p-value:1e-3
log p-value:-8.045e+00
Information Content per bp:1.787
Number of Target Sequences with motif105.0
Percentage of Target Sequences with motif8.82%
Number of Background Sequences with motif3013.6
Percentage of Background Sequences with motif6.26%
Average Position of motif in Targets98.0 +/- 57.3bp
Average Position of motif in Background99.0 +/- 63.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:forward strand
Alignment:AGCTWAGC-
----CAGCC
 C T G A A C T G G A T C A G C T C G T A C T G A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGCTWAGC
GGATTAGC
 C T G A A C T G G A T C A G C T C G T A C T G A A C T G A G T C
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

GATA2/MA0036.3/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGCTWAGC-
NNAGATAAGNN
 A C G T A C G T C T G A A C T G G A T C A G C T C G T A C T G A A C T G A G T C A C G T
C T G A T C G A C G T A T C A G C G T A G C A T C G T A C G T A T C A G T C G A G C T A

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGCTWAGC-
CAGATAAGGN
 A C G T C T G A A C T G G A T C A G C T C G T A C T G A A C T G A G T C A C G T
T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGCTWAGC-
NAGATAAGNN
 A C G T C T G A A C T G G A T C A G C T C G T A C T G A A C T G A G T C A C G T
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGCTWAGC
NVAGATAAGR
 A C G T A C G T C T G A A C T G G A T C A G C T C G T A C T G A A C T G A G T C
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A

Gata1/MA0035.3/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGCTWAGC-
ANAGATAAGAA
 A C G T A C G T C T G A A C T G G A T C A G C T C G T A C T G A A C T G A G T C A C G T
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

GATA6/MA1104.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGCTWAGC--
AAAAGATAAGAAA
 A C G T A C G T A C G T C T G A A C T G G A T C A G C T C G T A C T G A A C T G A G T C A C G T A C G T
C G T A C G T A T C G A G C T A T C A G C T G A C G A T C G T A C G T A T A C G T C G A C G T A C G T A

Gata4/MA0482.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGCTWAGC
NNGAGATAAGA
 A C G T A C G T A C G T C T G A A C T G G A T C A G C T C G T A C T G A A C T G A G T C
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

PB0023.1_Gata6_1/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AGCTWAGC----
TATAGAGATAAGAATTG
 A C G T A C G T A C G T A C G T A C G T C T G A A C T G G A T C A G C T C G T A C T G A A C T G A G T C A C G T A C G T A C G T A C G T
C G A T G T C A C G A T T G C A C A G T G C T A A C T G C G T A A G C T C G T A C G T A A T C G T G C A C T G A C G A T G C A T T C A G