Information for 24-CAGCTCACCCCA (Motif 32)

A G T C C G T A A C T G A T G C A C G T A G T C C G T A A T G C A G T C A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G C T A G A C T G A T C G A C G T A C T G C G T A A T C G A G T C A C G T A C T G
p-value:1e-1
log p-value:-3.043e+00
Information Content per bp:1.926
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif14.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets91.9 +/- 61.8bp
Average Position of motif in Background95.2 +/- 48.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF1/MA0595.1/Jaspar

Match Rank:1
Score:0.77
Offset:3
Orientation:forward strand
Alignment:CAGCTCACCCCA-
---ATCACCCCAC
 A G T C C G T A A C T G A T G C A C G T A G T C C G T A A T G C A G T C A G T C A G T C C G T A A C G T
A C G T A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CAGCTCACCCCA-
-CNGTCACGCCAC
 A G T C C G T A A C T G A T G C A C G T A G T C C G T A A T G C A G T C A G T C A G T C C G T A A C G T
A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

SREBF2/MA0596.1/Jaspar

Match Rank:3
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:CAGCTCACCCCA-
---ATCACCCCAT
 A G T C C G T A A C T G A T G C A C G T A G T C C G T A A T G C A G T C A G T C A G T C C G T A A C G T
A C G T A C G T A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.74
Offset:3
Orientation:forward strand
Alignment:CAGCTCACCCCA-
---ATCACCCCAT
 A G T C C G T A A C T G A T G C A C G T A G T C C G T A A T G C A G T C A G T C A G T C C G T A A C G T
A C G T A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CAGCTCACCCCA--
--GCTCCGCCCMCY
 A G T C C G T A A C T G A T G C A C G T A G T C C G T A A T G C A G T C A G T C A G T C C G T A A C G T A C G T
A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAGCTCACCCCA
AAGGTCAC----
 A G T C C G T A A C T G A T G C A C G T A G T C C G T A A T G C A G T C A G T C A G T C C G T A
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAGCTCACCCCA
TRAGGTCA-----
 A C G T A G T C C G T A A C T G A T G C A C G T A G T C C G T A A T G C A G T C A G T C A G T C C G T A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGCTCACCCCA
-AGGTCA-----
 A G T C C G T A A C T G A T G C A C G T A G T C C G T A A T G C A G T C A G T C A G T C C G T A
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAGCTCACCCCA--
NAGCCCCGCCCCCN
 A G T C C G T A A C T G A T G C A C G T A G T C C G T A A T G C A G T C A G T C A G T C C G T A A C G T A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

RORA/MA0071.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CAGCTCACCCCA
ATCAAGGTCA-----
 A C G T A C G T A C G T A G T C C G T A A C T G A T G C A C G T A G T C C G T A A T G C A G T C A G T C A G T C C G T A
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T