Information for 4-VCAGCTGNBN (Motif 5)

T G C A A T G C G C T A C A T G G T A C C G A T T C A G A C G T A G T C C G A T
Reverse Opposite:
G C T A T C A G T G C A A G T C G C T A C A T G G T A C C G A T T A C G A C G T
p-value:1e-21
log p-value:-4.868e+01
Information Content per bp:1.461
Number of Target Sequences with motif274.0
Percentage of Target Sequences with motif23.01%
Number of Background Sequences with motif6199.5
Percentage of Background Sequences with motif12.87%
Average Position of motif in Targets99.8 +/- 54.9bp
Average Position of motif in Background98.9 +/- 62.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer

Match Rank:1
Score:0.92
Offset:0
Orientation:forward strand
Alignment:VCAGCTGNBN
MCAGCTGBYH
 T G C A A T G C G C T A C A T G G T A C C G A T T C A G A C G T A G T C C G A T
T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C G T G A C T G A T C

BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:2
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:VCAGCTGNBN
MCAGCTGKTN
 T G C A A T G C G C T A C A T G G T A C C G A T T C A G A C G T A G T C C G A T
T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G A G C T G A T C

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:3
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:VCAGCTGNBN
HCAGCTGDTN
 T G C A A T G C G C T A C A T G G T A C C G A T T C A G A C G T A G T C C G A T
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-VCAGCTGNBN
ANCAGCTG---
 A C G T T G C A A T G C G C T A C A T G G T A C C G A T T C A G A C G T A G T C C G A T
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.89
Offset:0
Orientation:forward strand
Alignment:VCAGCTGNBN
NCAGCTGCTG
 T G C A A T G C G C T A C A T G G T A C C G A T T C A G A C G T A G T C C G A T
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:6
Score:0.89
Offset:-3
Orientation:forward strand
Alignment:---VCAGCTGNBN
VNAVCAGCTGGC-
 A C G T A C G T A C G T T G C A A T G C G C T A C A T G G T A C C G A T T C A G A C G T A G T C C G A T
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:7
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:VCAGCTGNBN
CCAGCTGTTN
 T G C A A T G C G C T A C A T G G T A C C G A T T C A G A C G T A G T C C G A T
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:8
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-VCAGCTGNBN
AACAGCTG---
 A C G T T G C A A T G C G C T A C A T G G T A C C G A T T C A G A C G T A G T C C G A T
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T

TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer

Match Rank:9
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-VCAGCTGNBN
DMCAGATGKS-
 A C G T T G C A A T G C G C T A C A T G G T A C C G A T T C A G A C G T A G T C C G A T
C G T A T G A C A G T C C G T A A C T G G T C A A C G T A C T G A C G T A T G C A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.88
Offset:-3
Orientation:forward strand
Alignment:---VCAGCTGNBN
NNVVCAGCTGBN-
 A C G T A C G T A C G T T G C A A T G C G C T A C A T G G T A C C G A T T C A G A C G T A G T C C G A T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T