Information for 14-TGCTTAGCAACG (Motif 10)

A C G T A C T G A G T C A C G T C G A T C G T A A C T G G T A C C G T A C T G A G T A C T A C G
Reverse Opposite:
A T G C A C T G A G C T A C G T A C T G A G T C A C G T C G T A C G T A C T A G A G T C C G T A
p-value:1e-13
log p-value:-3.087e+01
Information Content per bp:1.825
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif15.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets90.4 +/- 53.3bp
Average Position of motif in Background91.3 +/- 61.3bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TGCTTAGCAACG--
CCGCATAGCAACGGA
 A C G T A C G T A C T G A G T C A C G T C G A T C G T A A C T G G T A C C G T A C T G A G T A C T A C G A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TGCTTAGCAACG--
TACCATAGCAACGGT
 A C G T A C G T A C T G A G T C A C G T C G A T C G T A A C T G G T A C C G T A C T G A G T A C T A C G A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0054.1_Rfx3_1/Jaspar

Match Rank:3
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----TGCTTAGCAACG------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G A T C G T A A C T G G T A C C G T A C T G A G T A C T A C G A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:4
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TGCTTAGCAACG
TGTTKCCTAGCAACM
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G A T C G T A A C T G G T A C C G T A C T G A G T A C T A C G
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TGCTTAGCAACG-
-SCCTAGCAACAG
 A C G T A C T G A G T C A C G T C G A T C G T A A C T G G T A C C G T A C T G A G T A C T A C G A C G T
A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

NFIC/MA0161.2/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGCTTAGCAACG
TACTTGGCAGA-
 A C G T A C T G A G T C A C G T C G A T C G T A A C T G G T A C C G T A C T G A G T A C T A C G
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGCTTAGCAACG
NTTTCTNAGAAA--
 A C G T A C G T A C G T A C T G A G T C A C G T C G A T C G T A A C T G G T A C C G T A C T G A G T A C T A C G
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TGCTTAGCAACG
AATTTGCTGAC-----
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G A T C G T A A C T G G T A C C G T A C T G A G T A C T A C G
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGCTTAGCAACG--
NTNTTCTTATCAGTNTN
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G A T C G T A A C T G G T A C C G T A C T G A G T A C T A C G A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGCTTAGCAACG--
NTGCTGAGTCATCCN
 A C G T A C G T A C T G A G T C A C G T C G A T C G T A A C T G G T A C C G T A C T G A G T A C T A C G A C G T A C G T
T A C G G A C T A C T G A T G C G A C T A C T G G T C A A T C G C G A T G T A C C G T A A G C T A T G C T A G C A G C T