Information for 9-ATGTGTTW (Motif 15)

C G T A A G C T A T C G A C G T A C T G A C G T A C G T C G A T
Reverse Opposite:
C G T A C G T A C G T A A G T C C G T A A T G C C T G A A C G T
p-value:1e-10
log p-value:-2.408e+01
Information Content per bp:1.898
Number of Target Sequences with motif97.0
Percentage of Target Sequences with motif7.29%
Number of Background Sequences with motif1677.6
Percentage of Background Sequences with motif3.52%
Average Position of motif in Targets106.1 +/- 59.1bp
Average Position of motif in Background98.8 +/- 61.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CLOCK/MA0819.1/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---ATGTGTTW
AACACGTGTT-
 A C G T A C G T A C G T C G T A A G C T A T C G A C G T A C T G A C G T A C G T C G A T
C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:ATGTGTTW
AGGTGTGA
 C G T A A G C T A T C G A C G T A C T G A C G T A C G T C G A T
C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A

TBX5/MA0807.1/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:ATGTGTTW
AGGTGTGA
 C G T A A G C T A T C G A C G T A C T G A C G T A C G T C G A T
C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:ATGTGTTW--
AGGTGTGAAM
 C G T A A G C T A T C G A C G T A C T G A C G T A C G T C G A T A C G T A C G T
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

TBX2/MA0688.1/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ATGTGTTW--
AAGGTGTGAAA
 A C G T C G T A A G C T A T C G A C G T A C T G A C G T A C G T C G A T A C G T A C G T
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ATGTGTTW--
AGGTGTTAAT
 C G T A A G C T A T C G A C G T A C T G A C G T A C G T C G A T A C G T A C G T
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:7
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ATGTGTTW-
AAGGTGTKAA
 A C G T C G T A A G C T A T C G A C G T A C T G A C G T A C G T C G A T A C G T
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ATGTGTTW
AGGTGTCA
 C G T A A G C T A T C G A C G T A C T G A C G T A C G T C G A T
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

MAX/MA0058.3/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ATGTGTTW
NNCACGTGGT-
 A C G T A C G T A C G T C G T A A G C T A T C G A C G T A C T G A C G T A C G T C G A T
C T G A T A C G T G A C C T G A A G T C T C A G G A C T A C T G A C T G A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:10
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ATGTGTTW
ACCATATGTT-
 A C G T A C G T A C G T C G T A A G C T A T C G A C G T A C T G A C G T A C G T C G A T
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T