Information for 11-CCTGCCAGGC (Motif 11)

T G A C A T G C G A C T A T C G T A G C A G T C C T G A C T A G A T C G T A G C
Reverse Opposite:
A T C G T A G C G A T C G A C T T C A G A T C G T A G C C T G A T A C G A C T G
p-value:1e-8
log p-value:-2.072e+01
Information Content per bp:1.474
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif6.00%
Number of Background Sequences with motif1165.0
Percentage of Background Sequences with motif2.40%
Average Position of motif in Targets97.3 +/- 53.5bp
Average Position of motif in Background98.6 +/- 61.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CCTGCCAGGC
-TTGCCAAG-
 T G A C A T G C G A C T A T C G T A G C A G T C C T G A C T A G A T C G T A G C
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:2
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CCTGCCAGGC
--TGCCAGCB
 T G A C A T G C G A C T A T C G T A G C A G T C C T G A C T A G A T C G T A G C
A C G T A C G T G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CCTGCCAGGC
VBTGWCAGCB
 T G A C A T G C G A C T A T C G T A G C A G T C C T G A C T A G A T C G T A G C
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCTGCCAGGC
CGTGCCAAG-
 T G A C A T G C G A C T A T C G T A G C A G T C C T G A C T A G A T C G T A G C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCTGCCAGGC-----
SCAGYCADGCATGAC
 T G A C A T G C G A C T A T C G T A G C A G T C C T G A C T A G A T C G T A G C A C G T A C G T A C G T A C G T A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

NFIC/MA0161.2/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCTGCCAGGC-
NNTGCCAAGNN
 T G A C A T G C G A C T A T C G T A G C A G T C C T G A C T A G A T C G T A G C A C G T
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CCTGCCAGGC--
----CTAGGCCT
 T G A C A T G C G A C T A T C G T A G C A G T C C T G A C T A G A T C G T A G C A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCTGCCAGGC
-TTGACAGC-
 T G A C A T G C G A C T A T C G T A G C A G T C C T G A C T A G A T C G T A G C
A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CCTGCCAGGC--
----CNAGGCCT
 T G A C A T G C G A C T A T C G T A G C A G T C C T G A C T A G A T C G T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCTGCCAGGC
---CACAGN-
 T G A C A T G C G A C T A T C G T A G C A G T C C T G A C T A G A T C G T A G C
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T