Information for 12-GCGGTAGGAT (Motif 14)

A T C G A G T C C A T G A T C G A C G T C G T A A C T G A C T G G T C A C G A T
Reverse Opposite:
G C T A A C G T A G T C A G T C G C A T C G T A A T G C G T A C C T A G A T G C
p-value:1e-8
log p-value:-1.886e+01
Information Content per bp:1.850
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif77.9
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets90.6 +/- 51.6bp
Average Position of motif in Background103.5 +/- 49.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCGGTAGGAT------
CTACTAGGATGTNNTN
 A T C G A G T C C A T G A T C G A C G T C G T A A C T G A C T G G T C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCGGTAGGAT
TGGCAGTTGG--
 A C G T A C G T A T C G A G T C C A T G A T C G A C G T C G T A A C T G A C T G G T C A C G A T
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCGGTAGGAT
TTGCGGTTT---
 A C G T A C G T A T C G A G T C C A T G A T C G A C G T C G T A A C T G A C T G G T C A C G A T
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GCGGTAGGAT---
-----NGGATTAN
 A T C G A G T C C A T G A T C G A C G T C G T A A C T G A C T G G T C A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

PB0150.1_Mybl1_2/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCGGTAGGAT-
CACGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A T C G A G T C C A T G A T C G A C G T C G T A A C T G A C T G G T C A C G A T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

E2F4/MA0470.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCGGTAGGAT
GGGCGGGAAGG-
 A C G T A C G T A T C G A G T C C A T G A T C G A C G T C G T A A C T G A C T G G T C A C G A T
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCGGTAGGAT
GGGCGGGAAGG-
 A C G T A C G T A T C G A G T C C A T G A T C G A C G T C G T A A C T G A C T G G T C A C G A T
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GCGGTAGGAT--
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C G T A T C G A G T C C A T G A T C G A C G T C G T A A C T G A C T G G T C A C G A T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GCGGTAGGAT
TTTGCGGTTT---
 A C G T A C G T A C G T A T C G A G T C C A T G A T C G A C G T C G T A A C T G A C T G G T C A C G A T
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCGGTAGGAT
GGCVGTTR---
 A C G T A T C G A G T C C A T G A T C G A C G T C G T A A C T G A C T G G T C A C G A T
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T A C G T