Information for 13-CAGGGGAATKAC (Motif 16)

A G T C C G T A A C T G C T A G A C T G A C T G C T G A C G T A A C G T A C T G C G T A A T G C
Reverse Opposite:
A T C G A C G T T G A C G T C A A C G T A G C T G T A C G T A C A G T C G T A C C G A T A C T G
p-value:1e-7
log p-value:-1.721e+01
Information Content per bp:1.832
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif24.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets95.2 +/- 62.1bp
Average Position of motif in Background100.8 +/- 63.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELB/MA1117.1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CAGGGGAATKAC
NNGGGGAATNC-
 A G T C C G T A A C T G C T A G A C T G A C T G C T G A C G T A A C G T A C T G C G T A A T G C
A T G C G T A C A T C G C A T G C A T G C T A G C T G A G C T A G C A T G A C T G A T C A C G T

SPIB/MA0081.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CAGGGGAATKAC
-AGAGGAA----
 A G T C C G T A A C T G C T A G A C T G A C T G C T G A C G T A A C G T A C T G C G T A A T G C
A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAGGGGAATKAC--
-AGGGGAATCCCCT
 A G T C C G T A A C T G C T A G A C T G A C T G C T G A C G T A A C G T A C T G C G T A A T G C A C G T A C G T
A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAGGGGAATKAC-
-NGGGGATTTCCC
 A G T C C G T A A C T G C T A G A C T G A C T G C T G A C G T A A C G T A C T G C G T A A T G C A C G T
A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

MZF1/MA0056.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAGGGGAATKAC
-TGGGGA-----
 A G T C C G T A A C T G C T A G A C T G A C T G C T G A C G T A A C G T A C T G C G T A A T G C
A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T

PH0053.1_Hoxa6/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAGGGGAATKAC-----
-AAGGTAATTACCTAAT
 A G T C C G T A A C T G C T A G A C T G A C T G C T G A C G T A A C G T A C T G C G T A A T G C A C G T A C G T A C G T A C G T A C G T
A C G T T C G A G T C A C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A T G A C G A T C G A C T G T C A C G T A C A G T

NFKB2/MA0778.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAGGGGAATKAC--
-AGGGGAATCCCCT
 A G T C C G T A A C T G C T A G A C T G A C T G C T G A C G T A A C G T A C T G C G T A A T G C A C G T A C G T
A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

PH0061.1_Hoxb6/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAGGGGAATKAC---
TATTGGTAATTACCTT
 A C G T A G T C C G T A A C T G C T A G A C T G A C T G C T G A C G T A A C G T A C T G C G T A A T G C A C G T A C G T A C G T
G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T

Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CAGGGGAATKAC
--NDGTAATTAC
 A G T C C G T A A C T G C T A G A C T G A C T G C T G A C G T A A C G T A C T G C G T A A T G C
A C G T A C G T T C G A C A G T A C T G A G C T C G T A C G T A A C G T A C G T C T G A T A G C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CAGGGGAATKAC-
---GGGAATTTCC
 A G T C C G T A A C T G C T A G A C T G A C T G C T G A C G T A A C G T A C T G C G T A A T G C A C G T
A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C