Information for 1-CCACTAGGGGGC (Motif 2)

A T G C A G T C C T G A A T G C A G C T C G T A C T A G C T A G C A T G A C T G C T A G G T A C
Reverse Opposite:
C A T G A G T C A G T C G T A C G A T C A G T C A C G T T C G A A T C G A G C T A C T G T A C G
p-value:1e-45
log p-value:-1.037e+02
Information Content per bp:1.766
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif5.57%
Number of Background Sequences with motif155.4
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets100.4 +/- 41.5bp
Average Position of motif in Background88.0 +/- 58.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-CCACTAGGGGGC-------
GCCASCAGGGGGCGCYVNNG
 A C G T A T G C A G T C C T G A A T G C A G C T C G T A C T A G C T A G C A T G A C T G C T A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.90
Offset:-3
Orientation:forward strand
Alignment:---CCACTAGGGGGC----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A T G C A G T C C T G A A T G C A G C T C G T A C T A G C T A G C A T G A C T G C T A G G T A C A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---CCACTAGGGGGC-----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A T G C A G T C C T G A A T G C A G C T C G T A C T A G C T A G C A T G A C T G C T A G G T A C A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCFL/MA1102.1/Jaspar

Match Rank:4
Score:0.82
Offset:1
Orientation:forward strand
Alignment:CCACTAGGGGGC---
-CACCAGGGGGCACC
 A T G C A G T C C T G A A T G C A G C T C G T A C T A G C T A G C A T G A C T G C T A G G T A C A C G T A C G T A C G T
A C G T T A G C T C G A T A G C A G T C T G C A T A C G T C A G A C T G T A C G A C T G G T A C T C G A A T G C A G T C

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCACTAGGGGGC
CACCCCCGGGGGGG
 A C G T A C G T A T G C A G T C C T G A A T G C A G C T C G T A C T A G C T A G C A T G A C T G C T A G G T A C
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCACTAGGGGGC--
CTCCCTGGGAGGCCN
 A C G T A T G C A G T C C T G A A T G C A G C T C G T A C T A G C T A G C A T G A C T G C T A G G T A C A C G T A C G T
T A G C G C A T A G T C G A T C A T G C G A C T C T A G A C T G A C T G C T G A A C T G C T A G A G T C T G A C C G A T

PB0103.1_Zic3_1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCACTAGGGGGC-
NCCCCCCCGGGGGGN
 A C G T A C G T A T G C A G T C C T G A A T G C A G C T C G T A C T A G C T A G C A T G A C T G C T A G G T A C A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCACTAGGGGGC-
ACCCCCCCGGGGGGN
 A C G T A C G T A T G C A G T C C T G A A T G C A G C T C G T A C T A G C T A G C A T G A C T G C T A G G T A C A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCACTAGGGGGC------
-NNNAAGGGGGCGGGNNN
 A T G C A G T C C T G A A T G C A G C T C G T A C T A G C T A G C A T G A C T G C T A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCACTAGGGGGC-
DCHCAGCAGGRGGCC
 A C G T A C G T A T G C A G T C C T G A A T G C A G C T C G T A C T A G C T A G C A T G A C T G C T A G G T A C A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C